| New model in OGS2.0 | DPOGS215640 |
|---|---|
| Genomic Position | scaffold75:+ 95861-114017 |
| See gene structure | |
| CDS Length | 4425 |
| Paired RNAseq reads | 950 |
| Single RNAseq reads | 2461 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009049 (1e-09) |
| Best Drosophila hit | patched (0.0) |
| Best Human hit | protein patched homolog 1 isoform L (5e-130) |
| Best NR hit (blastp) | putative hedgehog receptor [Junonia coenia] (0.0) |
| Best NR hit (blastx) | putative hedgehog receptor [Junonia coenia] (0.0) |
| GeneOntology terms | GO:0008158 hedgehog receptor activity GO:0005887 integral to plasma membrane GO:0007224 smoothened signaling pathway GO:0005886 plasma membrane GO:0045169 fusome GO:0005737 cytoplasm GO:0048477 oogenesis GO:0048471 perinuclear region of cytoplasm GO:0045879 negative regulation of smoothened signaling pathway GO:0048099 anterior/posterior lineage restriction, imaginal disc GO:0007350 blastoderm segmentation GO:0001746 Bolwig's organ morphogenesis GO:0030707 ovarian follicle cell development GO:0007422 peripheral nervous system development GO:0016021 integral to membrane GO:0009880 embryonic pattern specification GO:0007346 regulation of mitotic cell cycle GO:0004888 transmembrane receptor activity GO:0048100 wing disc anterior/posterior pattern formation GO:0007455 eye-antennal disc morphogenesis GO:0009952 anterior/posterior pattern formation GO:0016311 dephosphorylation GO:0006508 proteolysis GO:0048103 somatic stem cell division GO:0042078 germ-line stem cell division GO:0042306 regulation of protein import into nucleus GO:0005515 protein binding GO:0035225 determination of genital disc primordium GO:0007411 axon guidance GO:0007476 imaginal disc-derived wing morphogenesis GO:0030139 endocytic vesicle GO:0055088 lipid homeostasis GO:0030228 lipoprotein receptor activity |
| InterPro families | IPR004766 Transmembrane receptor, patched IPR003392 Patched IPR000731 Sterol-sensing domain |
| Orthology group | MCL12436 |
Nucleotide sequence:
ATGTCGGTAACTTCAAAGGGCCGGTCCGCCGCCCTGCCGGGGGCGCATTCGCTCGACTTT
TTACTAAGAAAACTCTGTAAACAAAATGATATGACGGACACCGGCCGTCTTCATGAGGAT
ACTGGTGACAGAGCTGGCCCCGAGATCATGGTGGCTCCCGATTCCGAGGCTCCTTCGAAT
CCTCGGATAGCGGCAACGAACGAGACTCCCTCAACAGCCGAGGCGCGACATAGCGCTGAT
CTTTACATACGAACCAGTTGGGTTGACGCTGCATTAGCTCTCTCGGAACTTGAAAAGGGT
AACATTGAAGGAGGTCGGACTTCACTGTGGATCAGGGCCTGGCTTCAGGAGCAGCTGTTT
ATTTTGGGCTGTTTCCTACAAGGCGACGCTGGGAAAGTTCTGTTCGTGGCTGTCCTAGTT
CTATCTACTTTCTGCGTCGGCCTCAAATCAGCCCAGATTCACACGAGGGTCGACCAGCTG
TGGGTTCAAGAGGGTGGTAGACTGGAAGCTGAATTGAAGTACACGGCTCAGGCCCTGGGT
GAGGCGGACTCCTCCACCCACCAGCTAATAATACAGACCGCCAAAGATCCAGACGTTTCG
TTACTACACGCTGGAGCTCTGCTTGAACACCTAAAGGTGGTACACGCAGCGACCCGTGTT
ACGGTTCACATGTACGATATTGAGTGGCGTCTGAAAGACCTCTGTTACAGTCCAAGTATA
CCAGACTTTGAAGGTTATCATCATATCGAGTCCATTATTGACAACGTAATCCCTTGTGCT
ATAATAACACCATTGGACTGCTTCTGGGAGGGATCAAAGTTACTCGGCCCGGATTATCCT
ATTTTTGTACCTCAGTTGAAGCACAAGTTTCTATGGACTCATTTAAATCCGCTAGAAGTA
TTAGAGGAGGTGAAGAAGTTGAAGTTTCAATTCCCTTTGAGTACGATGGAAGCGTACATG
AAGCGGGCTGGCATCACGACCGCCTACATGAAAAAGCCATGCTTGGATCCCACCGACCTC
CATTGTCCAGACACGGCGCCCAACAAAAAATCCGGCCACATTCCAGATGTGGCTGCGGAG
TTGTCTCACGGTTGTTACGGATTTGCCGCTGCGTACATGCACTGGCCGGAGCAGCTGATA
GTGGGGGGTGCGACGAGGAATTCCACGTCAGCCTTACGCAGCGCCCGCGCCCTGCAAACA
GTTGTACAATTGATGGGAGAGAGGGAAATGTACGAGTACTGGTCGGATCACTATAAGGTG
CATCAGATTGGATGGAATCAAGAGAAGGCAGCCGCTGTTCTGGACGCCTGGCAGCGAAAA
TTTGCTGCCGAAGTTAGAAAAATTACTACCTCAGGCTCAGTTTCTGCAGCATATAGTTTC
TACCCATTTTCGACATCGACTCTCGATGATATACTCGGAAAGTTCTCTGAAGTGTCATTG
AAGAACATTATTTTAGGATACATGTTTATGTTAATTTATGTTGCTGTAACGTTAATACAA
TGGCGAGACCCCATACGATCGCAGGCCGGCGTCGGTATAGCCGGTGTTATGTTATTGTCT
ATAACTGTTGCTGCTGGCTTAGGATTTTGTGCTTTGTTAGGCATACCATTCAACGCGTCA
AGTACACAGATAGTTCCATTCTTAGCTCTCGGACTCGGTGTTCAAGATATGTTCCTTCTG
ACTCACACTTATGTGGAGCAGGCTGGTGACGTACCGAGAGAAGAAAGGACAGGACTCGTG
TTGAAGAAGAGTGGCCTTAGTGTGCTGCTGGCATCATTGTGTAATGTGATGGCATTCCTT
GCCGCTGCCCTCCTACCTATACCAGCTTTCAGGGTTTTTTGTTTGCAGGCCGCGATTCTT
CTTCTGTTCAACCTTGGCTCTATGTTGCTCGTGTTCCCCGCCATGATCTCCTTGGATCTT
CGACGAAGATCCGCGGCGAGGGCGGATCTATTATGTTGTTTACTACCAGAAAGTCCTATG
CCGAGAAAGAAAATTCCCGATAGGACCAAATCGAGAAACAGCAAAAACGATAAGAATAAC
AGGCTAGACACCTCGAGACAGCCGTTGGATCCTGATGTCACGGAACATGAACAAAAAACG
TGCTGTCTCAGTCTTTCGCTTACGAGATGGGCCAAAAACCAATACGCGCCCTTCATTATG
CGTCCCGCTATTAAGGTCACATCGATGTTGGCTGTGATAGCAGTGATATTAGCGAGCGTC
TGGGGAGCCACGAAAGTAAAAGACGGCCTGGACCTTACAGACATAGTACCTGAGAACACG
GACGAACACGAGTTCCTGTCGAGACAGGAAAAGTATTTCGGTTTTTACAACATGTACGCT
GTGACTCAAGGGGACTTCGAATATCCGACGAACCAAAAACTGCTATACGAATACCACGAT
CAGTTCGTGCGAATACCAAACATTATAAAAAATGATAATGGCGGCCTCACGAAGTTTTGG
TTAAGTTTATTCAGGGATTGGTTGTTGGATTTACAAGCAGCCTTCGACAAGGAAGTTGCA
AGCGGTTGCATAACACAGGAATATTGGTGCAAGAATGCCAGCGACGAGGGCATTCTGGCC
TACAAACTCATGGTCCAAACTGGCCATGTTGACAATCCGATCGACAAATCCCTTGTAACC
GCCGGTCATAGATTGGTCGATAAAGATGGGATTATAAACCCGAAGGCTTTTTACAATTAT
CTATCGGCTTGGGCCACGAACGACGCGCTAGCGTATGGAGCTTCACAAGGAAATTTGAAA
CCTCAACCCCAAAGATGGATTCACTCTCCCGAAGACGTGCACTTAGAAATTAAGAAATCG
TCGCCATTAATATACGCCCAGCTGCCATTTTATTTATCCGGTCTCAGTGATACAGACAGT
ATTAAAACCCTCATAAGATCAGTTCGAGAACTGTGTCTGAAGTATGAAGCTAAGGGTCTC
CCTAACTTCCCGTCTGGGATTCCTTTCCTGTTTTGGGAGCAATATTTATATTTGAGGACA
TCATTGCTGCTGGCTTTGGCGTGTGCTCTGGCAGCTGTTTTTATTGCTGTGATGGTATTA
TTACTGAACGCGTGGGCGGCGGTGTTGGTGACGCTGTCGTTAGCGATGCTGGTGTTACAA
CTCCTCGGTGTAATGGCTTTATTGGGAGTCAAGCTGTCAGCGGTTCCGGCCGTCCTGCTC
GTGCTGGCTGTAGGACGAGGTGTCCACTTCACCGTTCACTTATGTCTGGCATTCGTAACA
TCAATAGGCTGTAAGCGGCGCCGTGCGTCCTTGGCGCTCGAGTCCGTGCTCGCGCCTGTC
GTCCACGGAGCCATAGCCGCCGCCCTCGCCGCCTCGATGCTGGCTACCAGCGAGTTTGGT
TTTGTCGCGCGACTCTTCCTGAGACTGCTGCTTGCCCTCGTTGTTCTTGGGCTGCTCGAT
GGATTGCTGTTCTTCCCTATAGTGTTGTCGATTTTGGGTCCAGCTGCTGAGGTCCGTCCA
TTGGAACACCCGGAGCGACTATCGACGCCGTCTCCTAAAAGTTCTCCAGTACATCCTCGC
AAGTTAATATCCGGGGAGAAGTCGAGTCGCACCAGTAAGTCAGCTCCACGGCCGAGTGCG
CCGTCCTTGACCACTATAACCGAGGAACCTTCCAGCTGGCACAGTTCGCATTCAGTACAG
TCCTCGATGCAGTCTATCGTGGTTCAACCTGAAGTGGTCGTGGAGACTACTTACAATGGT
AGCGACTCCGCCTCAGGAAGATCCACACCAACTAAGACTACGCATTCCGGAGCCATTACT
ACTAAGGTGACTGCGACGGCGAACATCAAAGTGGAAGTGGTCACACCCAGTGACAGGAAG
TCGAGGCGGTCGTATCACTACTACGATCGTAGGAGAGATCGGGATGACGACAGGGACAGG
GACCGGGATAGAGACAGGGACAGAGACCGGGACAGGGACAGGGATAGGGATCGACACCGG
GATCGGCACAGGGATGAGAGGGAACACCGAGCCTCCCCCAGAGAAAACGGAAGGGATTCC
GGGCTGCGGCGCCGTAACGGACTCCTTAAGGCAGTATTACGCGGATATTCACTAGATGGC
GCTGATTGCTATAGTGGAGGCTATATGACTGTGTTACAAGGGCCGGTATCAAATGTATTA
CTGAGGTACATGATACTGAAATCATTCCATATCATGACTCCAATATGCTTATTCAGAGTT
TTCATCTTCACTATACACGAGGAATTTCACGTATCTCATTCAATAGCCTATATTGTGTGG
GGATTTCTTAATAAAAAAAACTGTCGACTATCCGTATGTAGTGTGACGGTGCGTGAGTTA
TACGGACCGCTGGTCGAGAACATCGTGGGGTCATATCATGAGCATTCAAGCTGCGCCTTG
GACAATACGATCACAGGCCGTGATGTGCCCTTTGACCCGAGTTGA
Protein sequence:
MSVTSKGRSAALPGAHSLDFLLRKLCKQNDMTDTGRLHEDTGDRAGPEIMVAPDSEAPSN
PRIAATNETPSTAEARHSADLYIRTSWVDAALALSELEKGNIEGGRTSLWIRAWLQEQLF
ILGCFLQGDAGKVLFVAVLVLSTFCVGLKSAQIHTRVDQLWVQEGGRLEAELKYTAQALG
EADSSTHQLIIQTAKDPDVSLLHAGALLEHLKVVHAATRVTVHMYDIEWRLKDLCYSPSI
PDFEGYHHIESIIDNVIPCAIITPLDCFWEGSKLLGPDYPIFVPQLKHKFLWTHLNPLEV
LEEVKKLKFQFPLSTMEAYMKRAGITTAYMKKPCLDPTDLHCPDTAPNKKSGHIPDVAAE
LSHGCYGFAAAYMHWPEQLIVGGATRNSTSALRSARALQTVVQLMGEREMYEYWSDHYKV
HQIGWNQEKAAAVLDAWQRKFAAEVRKITTSGSVSAAYSFYPFSTSTLDDILGKFSEVSL
KNIILGYMFMLIYVAVTLIQWRDPIRSQAGVGIAGVMLLSITVAAGLGFCALLGIPFNAS
STQIVPFLALGLGVQDMFLLTHTYVEQAGDVPREERTGLVLKKSGLSVLLASLCNVMAFL
AAALLPIPAFRVFCLQAAILLLFNLGSMLLVFPAMISLDLRRRSAARADLLCCLLPESPM
PRKKIPDRTKSRNSKNDKNNRLDTSRQPLDPDVTEHEQKTCCLSLSLTRWAKNQYAPFIM
RPAIKVTSMLAVIAVILASVWGATKVKDGLDLTDIVPENTDEHEFLSRQEKYFGFYNMYA
VTQGDFEYPTNQKLLYEYHDQFVRIPNIIKNDNGGLTKFWLSLFRDWLLDLQAAFDKEVA
SGCITQEYWCKNASDEGILAYKLMVQTGHVDNPIDKSLVTAGHRLVDKDGIINPKAFYNY
LSAWATNDALAYGASQGNLKPQPQRWIHSPEDVHLEIKKSSPLIYAQLPFYLSGLSDTDS
IKTLIRSVRELCLKYEAKGLPNFPSGIPFLFWEQYLYLRTSLLLALACALAAVFIAVMVL
LLNAWAAVLVTLSLAMLVLQLLGVMALLGVKLSAVPAVLLVLAVGRGVHFTVHLCLAFVT
SIGCKRRRASLALESVLAPVVHGAIAAALAASMLATSEFGFVARLFLRLLLALVVLGLLD
GLLFFPIVLSILGPAAEVRPLEHPERLSTPSPKSSPVHPRKLISGEKSSRTSKSAPRPSA
PSLTTITEEPSSWHSSHSVQSSMQSIVVQPEVVVETTYNGSDSASGRSTPTKTTHSGAIT
TKVTATANIKVEVVTPSDRKSRRSYHYYDRRRDRDDDRDRDRDRDRDRDRDRDRDRDRHR
DRHRDEREHRASPRENGRDSGLRRRNGLLKAVLRGYSLDGADCYSGGYMTVLQGPVSNVL
LRYMILKSFHIMTPICLFRVFIFTIHEEFHVSHSIAYIVWGFLNKKNCRLSVCSVTVREL
YGPLVENIVGSYHEHSSCALDNTITGRDVPFDPS