| New model in OGS2.0 | DPOGS215642 |
|---|---|
| Genomic Position | scaffold75:+ 140195-153880 |
| See gene structure | |
| CDS Length | 3288 |
| Paired RNAseq reads | 366 |
| Single RNAseq reads | 930 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003650 (0.0) |
| Best Drosophila hit | CG4587, isoform B (0.0) |
| Best Human hit | voltage-dependent calcium channel subunit alpha-2/delta-4 (5e-112) |
| Best NR hit (blastp) | PREDICTED: similar to voltage-gated calcium channel alpha2-delta subunit 1 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to voltage-gated calcium channel alpha2-delta subunit 1 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005245 voltage-gated calcium channel activity GO:0016020 membrane |
| InterPro families | IPR013608 VWA N-terminal IPR004010 Cache IPR013680 Voltage-dependent calcium channel, alpha-2/delta subunit, conserved region IPR002035 von Willebrand factor, type A |
| Orthology group | MCL10127 |
Nucleotide sequence:
ATGGATTCCGCGGAAGCTGCGGCGTTATCCGCGGGCAGCACATCCGATGGCTCTCCAGGC
TCTTACTACGACGCTCGATGGCTGAACGTTCATGCTGATGATGGAACCCTCGCTGCACGA
GCGAGAAGACTATTACTCTCGCCCAGCAGACACTTCGATCATATTGCTGTGAACACTAGC
TACAGCGCGGTCCTGATGCCGCCTTATATAAACACGGAAGACCCCGAAGTTCAAAACCAA
ATAGCTTGGTCGGAACATTTAGACCCGCTCTTTGTTAACAACTACGAAATCGATCCTACA
CTATCATGGCAGTATTACGCATCCTCCAACGGCTTTATGAGGCGTTACCCAGCGATGTCG
TGGCCACCAGAAGACGGTTACTCCCACCACGCAAGAGATTTCTACGACTTCAGGTCATCG
AACTGGTTTGTTGAAGCCGCTACATCACCGAAGGATCTGGTGATTCTTTTGGACGACTCG
GACGACATCAGTTCGTCTTATCACCGCCTGGCCAAAGCGACTGTATCCGCGCTGCTTGAT
ACACTCGGACCCAACGACTTTGTTAACATTTATAGATACAGTGACACTGTGTCGGAGTTG
CATCAATGTTACACGAAAATATTGGCCCAGGCGGTACCGGAAACAATACGAGAGCTGAAA
AGCGCTGTTTGGGGATCGGAAGTGACGGGTGGCGCAGCAAATCTGACCGGTGCTTTGACA
ACAGCATTTGAGATTCTCCATCGGTACAATCGAACTGGTCAAGGCTGTCAATGTAACCAA
GCTATAGCCGTGGTTGGGGCGGGGGGTGGCACTGCTGGGGTAAAGACAGTTTTCCGTACT
TGGAACTGGCCTCATATGCCCGTCCGTATATTCACGTACAGGGTCGGCGGCGACGCGGCC
TCAGGTCACGATATGAAAGACATGGCTTGCACCAACAAAGGATTCCACGTGACTATAAAT
GATCACAGCGAGGTGCGTCACAAGGTGCTGCATCTTGTAGAGGTGTTAGCAAGACCTATG
GTCATGTATCAAACTCTACACCCTGTACACTGGAGCCCCGTATACGTTGGTGGAAGGAGT
AGCAGCTTGGACGACGATGGAATGGGACAGTTGATGACGTCAGTTACGGTCCCTATATTC
GACAGGAGAAATCACACGCAAAGGGAGGCTAATTTGCTTGGGGTGGTGGGCACGGATGTT
CCTGTTGATCAAATAAAGAAGCTCGTGCCACCATATAAATTGGGAGTGAACGGTTACTCT
TTCATGGTGGATAACAACGGGCATGTTCTGTACCACCCGGATTTGAGACCTTTGCACACC
AACGAGGAGTACACCGAAACATTGAGACCACTTTACTCGAGCGTCGACATCACTGACGTA
GAACTACTCGTGGATTCCGATGAGAATTCCAGAGTTAATTTAACTTCTCTGCTATTGGAC
CTTCGCCACGATATGATCGAGCAACGTGAGGGAGAAACCGAAATGGGTGTGAAGGTAGCT
TACGAGGGTATGAGACGCGTCGGTACGAGACGTCAAAGATATTTCTACGGCCCCGTTGAA
GGAACACCGTACTCCCTGGCCGCTGTCCTACCTGATGGATACGGCATGTATGAACTGCAG
GCTGAACAGGAAATTAAACACAGTCCCATAAACGTCACGGAATACTTTAAGGGAGACAAC
TGGAAGATCCATCCAGATTGGGTATACTGTGAGTATGCGTCCACATCCGACCAGACTTTC
TCGAGCCCCGAGGAGCAACTACTTCATTTCCTGAGTAGGTCAGGCCGTCCTGGCTGGAAG
TGGATGTCTCTGCGGCCTCGCGCTCTCACTCTTCATAACGCACACAAGAAGCAGGACAGA
GACTCTTACTATTGTGATAAAACGTTAGTTCAGTCTCTAGTCCGAGATGCAATGGTAATT
AAAGAATTGGACGCTCACATTGGACACGCCAGCCATCACACACAGCAAGGCCGATTTCAC
AAATTCGTCGTGACGTTGTCCTTCATCGCTACCAGAAGCGGTTTATTGAAATGGACTGAA
AATGTCAACACGTCCAGAACAGCTGACTCCTCTGAACCACACTTCAGCGAGAAATATGCT
CGCGCTTTCGACTCCGAATGGTACCGGCGTGCGGTGGAACATCATTCCATTGAACCGGAG
AGTTTTGTTTTCTCTGTGCCCTTCCGAGACGGTTCGGAGCCCGAGGACTTCAGCGGCAAA
CCAACGTTAGTGCTAGCGACACACGCCGTCTTCGTTGAATCGAGGGGACATCGCGCACCG
GCCGCAGTAGTCGGATTACACTTCCAACTAGATTCTCTCGCTAGGCATTTCTTGAACGTT
ACGTCGACGTGCACGGCGGGCAGTGTCTGCAAGAAAACCTGCGCTGGTGATGAATTGGAT
TGTTACATACTTGACGACAATGGATTTATCATTTTGTCTGAAGATGTTTCACAAACTGGA
CGTTTCTTTGGGCAAGTTGATGGGACTATAATGGATTCGCTGGTTCAGGACAGAATTTAC
AAGAAAGTCACCGTCCATGACCATCAGGGCAGGTGTCCAGATTCAAGAAGCCCTTTCAGT
GGAGCATCCAACAAATTGACACCGATGAAACCTCTCGCCTGGCTTGGAAGTTACTTCACA
AATTTACTTACTATATGGTATCCTCTGCTCGAAACAATACATGCACGAGCGCACCCTCAT
GCCCAAGAAGAATTGGATTATGAAGATTACGAGACTGAGGATATGGAACACGAGGAAGAC
GTGGACCGTGATCGTGGTACATACGAGATTATCATAGACGGGCTCGGAGGCTCCGAGAAG
CACGAGCCTCCTCTCAACCCCGGGCCGCCACGGGAGCCACCTCGCGAGGCCGCACGCTCC
GCCGCCGTCCGACCCTGCGACACCAGCGCTGAACTCTTCACATTACAATCCACCAGATTA
AACGCCGCCCAACCACTTAAAGGAAAACTCACCAATTGCCACAACTCAGGATGCGAGAGG
CCGTTTAGCGTACAGAAGATACCACACAGCAACCTGATACTGTTGGTGGTGGACACGTTG
TGCCCCTGCGGCGCTAAGAGGTTAGACGTGCGGGCGAGGGAGGCGGGGCCGAGGGCCGCG
TGCCGGAGACCACCGCGAGCACTACCACGACGACGACCACGAGCCTGTGTCTCATATCAC
CCCGAGGAAATCGAGATCCAATCTTGCGGTCGCGGTGGCCGGACGGAGCCTACAATATTT
GTGTTCTCTGTGATCGTCCTACGAATTTTATTAAAATTCGCAACGTGA
Protein sequence:
MDSAEAAALSAGSTSDGSPGSYYDARWLNVHADDGTLAARARRLLLSPSRHFDHIAVNTS
YSAVLMPPYINTEDPEVQNQIAWSEHLDPLFVNNYEIDPTLSWQYYASSNGFMRRYPAMS
WPPEDGYSHHARDFYDFRSSNWFVEAATSPKDLVILLDDSDDISSSYHRLAKATVSALLD
TLGPNDFVNIYRYSDTVSELHQCYTKILAQAVPETIRELKSAVWGSEVTGGAANLTGALT
TAFEILHRYNRTGQGCQCNQAIAVVGAGGGTAGVKTVFRTWNWPHMPVRIFTYRVGGDAA
SGHDMKDMACTNKGFHVTINDHSEVRHKVLHLVEVLARPMVMYQTLHPVHWSPVYVGGRS
SSLDDDGMGQLMTSVTVPIFDRRNHTQREANLLGVVGTDVPVDQIKKLVPPYKLGVNGYS
FMVDNNGHVLYHPDLRPLHTNEEYTETLRPLYSSVDITDVELLVDSDENSRVNLTSLLLD
LRHDMIEQREGETEMGVKVAYEGMRRVGTRRQRYFYGPVEGTPYSLAAVLPDGYGMYELQ
AEQEIKHSPINVTEYFKGDNWKIHPDWVYCEYASTSDQTFSSPEEQLLHFLSRSGRPGWK
WMSLRPRALTLHNAHKKQDRDSYYCDKTLVQSLVRDAMVIKELDAHIGHASHHTQQGRFH
KFVVTLSFIATRSGLLKWTENVNTSRTADSSEPHFSEKYARAFDSEWYRRAVEHHSIEPE
SFVFSVPFRDGSEPEDFSGKPTLVLATHAVFVESRGHRAPAAVVGLHFQLDSLARHFLNV
TSTCTAGSVCKKTCAGDELDCYILDDNGFIILSEDVSQTGRFFGQVDGTIMDSLVQDRIY
KKVTVHDHQGRCPDSRSPFSGASNKLTPMKPLAWLGSYFTNLLTIWYPLLETIHARAHPH
AQEELDYEDYETEDMEHEEDVDRDRGTYEIIIDGLGGSEKHEPPLNPGPPREPPREAARS
AAVRPCDTSAELFTLQSTRLNAAQPLKGKLTNCHNSGCERPFSVQKIPHSNLILLVVDTL
CPCGAKRLDVRAREAGPRAACRRPPRALPRRRPRACVSYHPEEIEIQSCGRGGRTEPTIF
VFSVIVLRILLKFAT