| New model in OGS2.0 | DPOGS215644 |
|---|---|
| Genomic Position | scaffold75:+ 167846-169529 |
| See gene structure | |
| CDS Length | 1227 |
| Paired RNAseq reads | 256 |
| Single RNAseq reads | 595 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003543 (5e-119) |
| Best Drosophila hit | CG18480 (9e-17) |
| Best Human hit | leucine-rich repeat transmembrane neuronal protein 3 precursor (1e-09) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL009148 [Aedes aegypti] (3e-27) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004120 [Tribolium castaneum] (2e-27) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL16004 |
Nucleotide sequence:
ATGCAACATGAAATGTGGGGGTTAGTTTTTATCATCGCTTGTATAGGGACGAGTTTCTGT
ACGTATTGCCCGAAACAGTGCGACTGTGACCTCGATAATGGGATGAATAGGGCTGTGTGT
GTGGACCAAAACATTGTTAGTGTGGACATCGGCGTGCCAAAGGAAGTGCAAGTTTACAGC
CTAACTAGGAATGCCATAAGTGAACTTGATAACTTTTGTTTCAAGGAAATCGGATACACG
TCCATTAAAATATTGGATTTATCATATAATCTTATATTTTGGATTGGTCTCCATGCATTT
TCTGGTCTTAACGAGCTCGTGAACCTGGACATCAGCAATAACAGACTGAGATTCATTCCT
TCGGATTTATTTTGGGACACGCCGAACCTAGAGATACTAGATCTATCATCAAATGTTTTT
GAGAAATTAAAAAATGAACCAATTATCATGCATACGAAATTACAAGTGCTCAATCTTAAC
AGTTGTCGTATAAAATCTCTGCCAGAACGTCTCTTTAATAGATTGCCAAATTTAAAGAAG
CTGGATCTCAGTGAGAATTACGTTGTCACATTAAATTTAGATGTGTTGCGACCGCTACGA
AAACTGGAAAGGCTAGAACTTAGAAATGACTATTGGCAATGCAACCCAGGCTTCATTGCT
GTCGAGACATGGATTGTGTCACACCGAATTAAATACGATAAACAGTGCAAAAAGAAATTA
CCTAAAATGTCAGAAAAGATTGTCTCCATGACAGTCACCGAGATGTTGCCAGTCGATATA
AATAAAGTATGGAATATAACTAAAGATCAAAACAATACTTTAATATTATCAGTGTTGCCA
AATAATACAAAACCATTGACACCGTTTGAGAAATTTGATAAAGAGTTTTCAGCATTTCAA
GCGCTTATCATTGGCTTTGAGATTGGTTTGGCTGTTGGGATCGTAGGTACATACATTTGG
CTACGAATGTCTTGTGGTTGCCCTGGATTCTCCCGACAGCCCAATAGACGTCAAAGAGCG
AACTTACCAGATGGGGACATGAGGAGTAGTTTGCTTTGGAACAACGTCGTTGATCCTGAT
CTAGAAACTCCTCCGTACTTCAGGCGACAGTTAGCAGAAAGAAACCCAGCGTCCAACAGA
ACCGGCTTCCAAGTGGATGCCATTAGAAACGGTAACAGGGCTGAAACACCTCCGCCGCCG
TACAACGAGTGTCGTTTAAATTTATAA
Protein sequence:
MQHEMWGLVFIIACIGTSFCTYCPKQCDCDLDNGMNRAVCVDQNIVSVDIGVPKEVQVYS
LTRNAISELDNFCFKEIGYTSIKILDLSYNLIFWIGLHAFSGLNELVNLDISNNRLRFIP
SDLFWDTPNLEILDLSSNVFEKLKNEPIIMHTKLQVLNLNSCRIKSLPERLFNRLPNLKK
LDLSENYVVTLNLDVLRPLRKLERLELRNDYWQCNPGFIAVETWIVSHRIKYDKQCKKKL
PKMSEKIVSMTVTEMLPVDINKVWNITKDQNNTLILSVLPNNTKPLTPFEKFDKEFSAFQ
ALIIGFEIGLAVGIVGTYIWLRMSCGCPGFSRQPNRRQRANLPDGDMRSSLLWNNVVDPD
LETPPYFRRQLAERNPASNRTGFQVDAIRNGNRAETPPPPYNECRLNL