| New model in OGS2.0 | DPOGS207630 |
|---|---|
| Genomic Position | scaffold1631:- 4414-6611 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 645 |
| Single RNAseq reads | 1952 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006014 (2e-149) |
| Best Drosophila hit | transcription factor IIB (4e-134) |
| Best Human hit | transcription initiation factor IIB (1e-118) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010900 [Tribolium castaneum] (5e-152) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010900 [Tribolium castaneum] (4e-137) |
| GeneOntology terms | GO:0008134 transcription factor binding GO:0051101 regulation of DNA binding GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0005667 transcription factor complex GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016251 general RNA polymerase II transcription factor activity GO:0003743 translation initiation factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0006413 translational initiation |
| InterPro families | IPR013150 Transcription factor TFIIB, cyclin-related IPR013137 Zinc finger, TFIIB-type IPR006670 Cyclin IPR000812 Transcription factor TFIIB-related IPR013763 Cyclin-related IPR011028 Cyclin-like IPR023486 Transcription factor TFIIB, conserved site |
| Orthology group | MCL13331 |
Nucleotide sequence:
ATGATATGTTCAGAATGCGGCCTCGTTGTTGGCGACAGAGTTATAGATGTAGGTTCAGAA
TGGCGTACCTTCAGCAATGAGAAATCTGGAGTCGATCCATCTCGTGTGGGAGGTCCGGAA
AATCCTTTGCTATCAGGAGGGGATCTCTCCACTATCATTGGTCCCGGAAGAGGCGATGCT
TCCTTTGACAGTTTTGGGGTATCCAAATATCAAAACCGAAGAAATATAAGCAGCACAGAC
AGAGCGCTTATAAATGCGTTTAGAGAAATAAACACTATGGCTGATAGAATTAATCTGCCT
AAAACTATAGTGGACAGAGCCAATAATTTGTTTAAACAGGTACACGATGGAAAAAATTTA
AAAGGCAGAGCAAACGATGCAATAGCCTCAGCATGTCTATATATAGCTTGCCGGCAGGAA
GGAGTGCCGAGAACATTCAAAGAAATCTGTGCGGTTAGTAAAATTAGTAAGAAAGAAATT
GGAAGATGTTTCAAACTGATCCTTAAGGCTTTGGAAACGTCAGTGGACTTGATAACAACA
GCAGATTTCATGTCTCGGTTTTGTGCCAATCTGGGTTTACCAAACTCAGTGCAACGAGCT
GCAACACATATTGCAAGGAAAGCCGGGGAATTGGACATTGTGTCTGGAAGAAGTCCCATA
TCTGTGGCAGCCGCTGCCATATATATGGCTTCACAGGCGTCCGAGGATAAGCGTAGTCAG
AAAGAGATTGGTGATATAGCCGGTGTAGCGGATGTAACGATCAGACAGTCATACAAATTG
ATGTATCCATGTGCCGCAAAATTGTTCCCCGAAGACTTCAAGTTCGCTACACCCATTGAA
TTCCTACCGCAAATGTAA
Protein sequence:
MICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGDA
SFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNL
KGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSVDLITT
ADFMSRFCANLGLPNSVQRAATHIARKAGELDIVSGRSPISVAAAAIYMASQASEDKRSQ
KEIGDIAGVADVTIRQSYKLMYPCAAKLFPEDFKFATPIEFLPQM