| New model in OGS2.0 | DPOGS205650 |
|---|---|
| Genomic Position | scaffold67:- 152010-152537 |
| See gene structure | |
| CDS Length | 528 |
| Paired RNAseq reads | 5 |
| Single RNAseq reads | 15 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001000 (5e-42) |
| Best Drosophila hit | achaete (8e-19) |
| Best Human hit | PREDICTED: achaete-scute homolog 5 (9e-11) |
| Best NR hit (blastp) | achaete-scute-like protein ASH3 [Bombyx mori] (3e-44) |
| Best NR hit (blastx) | achaete-scute-like protein ASH3 [Bombyx mori] (8e-49) |
| GeneOntology terms | GO:0048477 oogenesis GO:0043565 sequence-specific DNA binding GO:0046982 protein heterodimerization activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0030528 transcription regulator activity GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0007399 nervous system development GO:0005634 nucleus GO:0003704 specific RNA polymerase II transcription factor activity GO:0016563 transcription activator activity GO:0045941 positive regulation of transcription GO:0007417 central nervous system development GO:0007422 peripheral nervous system development GO:0008407 bristle morphogenesis GO:0007400 neuroblast fate determination GO:0007419 ventral cord development GO:0007346 regulation of mitotic cell cycle |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain IPR015660 Achaete-scute transcription factor-related |
| Orthology group | MCL39489 |
Nucleotide sequence:
ATGGTGGATCAAGAAATGGATTGCACAGTGCGAAAATACAATTACAAAAATAATTCCGGA
CAAGCAGCATCTATTGCGAGGCGCAATGCAAGAGAGAGGAATCGCGTTAAACAAGTTAAT
GATGGTTTTAACGCTTTAAGAAAAAGATTACCCGCTGCCGTTGTGAATGCATTGTCTGGA
GGCGCTCGTCGGGGATCCGGCAAGAAATTGAGCAAAGTCGATACATTACGAATGGTGGTT
GAGTACATTAAATATTTGGAGAATTTAATCGACGAAAGTGATGCTTCATTGGGTGTTACC
AAAGAACCTATGGATACATCTGGAATTGATGAGGGAATTTTTGGAAGAACATCACCGTAC
TCTGACTCTGTACCATCGCCTGCTAACTCTGAATGTTCATCGGGGGTGTCTTCAAGCTAT
TCAAATGATCATTACCAAATTAACACTCACAACAATTACTATAGTGAAGTAAACGCAGTA
AATGATAGTGAATTATTAGATGCGATCACTTGGTGGCAGCAAAAGTAA
Protein sequence:
MVDQEMDCTVRKYNYKNNSGQAASIARRNARERNRVKQVNDGFNALRKRLPAAVVNALSG
GARRGSGKKLSKVDTLRMVVEYIKYLENLIDESDASLGVTKEPMDTSGIDEGIFGRTSPY
SDSVPSPANSECSSGVSSSYSNDHYQINTHNNYYSEVNAVNDSELLDAITWWQQK