DPGLEAN17269 in OGS1.0

New model in OGS2.0DPOGS205652 
Genomic Positionscaffold67:- 74350-74922
See gene structure
CDS Length573
Paired RNAseq reads  14
Single RNAseq reads  40
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA001001 (1e-73)
Best Drosophila hit  lethal of scute (7e-18)
Best Human hitachaete-scute homolog 1 (1e-11)
Best NR hit (blastp)  achaete-scute-like protein [Bombyx mori] (3e-83)
Best NR hit (blastx)  achaete-scute-like protein [Bombyx mori] (9e-73)
GeneOntology terms









  
GO:0046982 protein heterodimerization activity
GO:0043565 sequence-specific DNA binding
GO:0003704 specific RNA polymerase II transcription factor activity
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0005634 nucleus
GO:0007518 myoblast cell fate determination
GO:0007417 central nervous system development
GO:0007400 neuroblast fate determination
GO:0007422 peripheral nervous system development
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0007419 ventral cord development
InterPro families

  
IPR011598 Helix-loop-helix DNA-binding
IPR001092 Helix-loop-helix DNA-binding domain
IPR015660 Achaete-scute transcription factor-related
Orthology groupMCL11438

Nucleotide sequence:

ATGCCCATGGCGGCGGTACACGCTTACCAAAATCTCGGTGTAAACCAAAAATTGACTCAG
CTGCAAAATGCTAGACGTCTCGCACCTGCACCCGTAGATGCTCGCTGCAAAAAGAGATCT
TATCTCCATCAAACCTATCCCACTCAACCTGCTTCTGTAGCAAGAAGAAACGCAAGAGAA
AGGAATAGAGTGAAACAAGTTAATAATGGATTTGCTGCTCTACGACAACATATTCCATCA
GCTGTAACTGCGGCTTTGGCAGGCGGAAGAGGTTCTTCACGAAAATTAAGCAAAGTGGAT
ACTTTGAGACTAGCGGTTGAATACATAAGAAGCCTTAAACGATTATTAGAAGAAAGTGAA
GAAGGCTGTAATGAAGCACAAATGAGTTTGGGCTTAAGTTCAAATGGACCTCAAACACCC
CCTTTCTCAGAAGAATCCCATTCACCTGCACCCTCACTCCATTCAGAGGGTTCAACAGGT
CCAAATTGTCAAGATGCTTATGATTCCTATGAACCTATGAGTCCTGAAGATGAAGAATTA
TTAGATGTTATATCATGGTGGCAACAGCAATGA

Protein sequence:

MPMAAVHAYQNLGVNQKLTQLQNARRLAPAPVDARCKKRSYLHQTYPTQPASVARRNARE
RNRVKQVNNGFAALRQHIPSAVTAALAGGRGSSRKLSKVDTLRLAVEYIRSLKRLLEESE
EGCNEAQMSLGLSSNGPQTPPFSEESHSPAPSLHSEGSTGPNCQDAYDSYEPMSPEDEEL
LDVISWWQQQ