| New model in OGS2.0 | DPOGS205653 |
|---|---|
| Genomic Position | scaffold67:- 18170-19354 |
| See gene structure | |
| CDS Length | 1185 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 15 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001002 (4e-104) |
| Best Drosophila hit | asense (7e-12) |
| Best Human hit | achaete-scute homolog 1 (2e-07) |
| Best NR hit (blastp) | achaete-scute-like protein ASE [Bombyx mori] (3e-122) |
| Best NR hit (blastx) | achaete-scute-like protein ASE [Bombyx mori] (3e-105) |
| GeneOntology terms | GO:0007399 nervous system development GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0007400 neuroblast fate determination GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007417 central nervous system development GO:0007422 peripheral nervous system development GO:0045449 regulation of transcription GO:0030528 transcription regulator activity GO:0008407 bristle morphogenesis |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain IPR015660 Achaete-scute transcription factor-related |
| Orthology group | MCL39490 |
Nucleotide sequence:
ATGAGTTCCATAGGTGTTGTTGTGTTCCGTAATTCTCCGCTCAAACAGCAGGTGCTCCAA
GAATCTGTGAATAATTCTGTAAATATAAGCAATAACGATAACGTCCGTCGTGAAATCATA
ATTTTGAGAAAGAAACAAAAACATCAATCCCAAAACACAGTGTCAGTGACGTCGCTAGTG
AGTGCTTCAGAACCAAATAATATTGTCTTAGCTAAACGTCCTAAGCTACGTGAAAATATT
CCTGATGAATCTACACGTACCCCTACACCACTAGCGGTAGCGAGAAGAAATGCGCGGGAA
AGGAATCGTGTACGTCAAGTTAACGACGGTTTTGCTGCTTTACGGCGACATATACCTGAC
GAGGTCGCTGCAGCTTTCGAAAACGCGAATTCGAATAGAGGCCCTAATAAAAAGCTTAGT
AAAGTTGAAACACTGCGTATGGCTGTAGAATATATTAGAAATCTAGAGAATCTTCTTAAT
ATAGGGCATGGAGATAAAGAAAATATGTCACGACCATCAATGGAATCATTTCCATCACCA
GCATCTTCATCTCCTAGAGACAACAGCCAGGAAAGAAGTTATTATTCCCTAAATTCACCA
GCTCTTGATGATGAAGATATGGAGGAAGATGATTTGGACAGTTCCCTCCATCGACTCCCA
ACTCAGCAATATATGGACTTACCTTCTGAAACTTTTCAATTAGTTTCCACGCCACACTTA
TACGAGGAAGATGAATCTAGAAACCCACTTACTCCCTCATCTGACCTTCTCGGAGCGGAG
GAAATGCATTCTCATGTTTTGGAAACACACTTTCCATTTCCTAACTCAGCTGAACAATTC
ACAGTTATTCCTGAACAAAACTATTGTGAACCAGAAGCTGCATTGAATGATGGAGATTTT
GAAGTTAAATATGCTGAAACAATACAAAATATTCATCGCAACTTTGAAGAAGATTCACAG
CTGCCATTAGAAGCAATCAATCCAGATTTGATGCTGTCACATAATCAATATAAATTCAAG
GAAGAAAGTGAATATTTAGATCATCACTACAACGAGGTCGACCTTAAAAAGGAACTACCA
GACATACAAGTTACTCCAGAAGATCGTGAACAATTCGAAGAGACTCTTAAATGGTGGCAA
GAGAAAACTAGACAGGCGCGACCTATTCCTAAAAGCAGCACTTGA
Protein sequence:
MSSIGVVVFRNSPLKQQVLQESVNNSVNISNNDNVRREIIILRKKQKHQSQNTVSVTSLV
SASEPNNIVLAKRPKLRENIPDESTRTPTPLAVARRNARERNRVRQVNDGFAALRRHIPD
EVAAAFENANSNRGPNKKLSKVETLRMAVEYIRNLENLLNIGHGDKENMSRPSMESFPSP
ASSSPRDNSQERSYYSLNSPALDDEDMEEDDLDSSLHRLPTQQYMDLPSETFQLVSTPHL
YEEDESRNPLTPSSDLLGAEEMHSHVLETHFPFPNSAEQFTVIPEQNYCEPEAALNDGDF
EVKYAETIQNIHRNFEEDSQLPLEAINPDLMLSHNQYKFKEESEYLDHHYNEVDLKKELP
DIQVTPEDREQFEETLKWWQEKTRQARPIPKSST