| New model in OGS2.0 | DPOGS205639 |
|---|---|
| Genomic Position | scaffold67:+ 133437-134317 |
| See gene structure | |
| CDS Length | 708 |
| Paired RNAseq reads | 19 |
| Single RNAseq reads | 80 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001148 (7e-91) |
| Best Drosophila hit | achaete (6e-14) |
| Best Human hit | PREDICTED: achaete-scute homolog 5 (2e-08) |
| Best NR hit (blastp) | achaete-scute homolog ASH1 [Junonia coenia] (2e-110) |
| Best NR hit (blastx) | achaete-scute homolog ASH1 [Junonia coenia] (2e-100) |
| GeneOntology terms | GO:0048477 oogenesis GO:0043565 sequence-specific DNA binding GO:0046982 protein heterodimerization activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0030528 transcription regulator activity GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0007399 nervous system development GO:0005634 nucleus GO:0003704 specific RNA polymerase II transcription factor activity GO:0016563 transcription activator activity GO:0045941 positive regulation of transcription GO:0007417 central nervous system development GO:0007422 peripheral nervous system development GO:0008407 bristle morphogenesis GO:0007400 neuroblast fate determination GO:0007419 ventral cord development GO:0007346 regulation of mitotic cell cycle |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain IPR015660 Achaete-scute transcription factor-related |
| Orthology group | MCL39218 |
Nucleotide sequence:
ATGTTACAAGAAATACAACTCGTTCAAGGTCAGACCAACTATATGGTCGTCTCTTCGGGC
TATCCTACGTCTACTGTCACCAAGAATACAGAAAAAAGGATTCTACCGATTTCTACAGGT
GCTGAAAAAAATTATGTAACACACGATACTCCTCCAAACCTGCAGTACAGAAAAAAAGTG
CACTTTAGGACTAATCCATACACAGGACCTCAAGCTGTTTCAATTGCTAGACGCAATGCT
AGAGAACGTAACCGTGTGAAACAAGTTAATGATGGATTTAATGCACTACGCCGACATCTT
CCGGCCTCAGTGGTAGCGGCACTATCAGGTGGAGCTAGACGAGGTTCAGGGAAGAAACTG
AGTAAAGTGGACACATTGAGAATGGTCGTGGAATATATAAGATATTTACAGCAATTGCTT
GATGAAAGCGATGCGGCTTTGGGCATTACACGCGACCAGGAAAATAGAGAAAATATACCA
AGTGGTAATCAAACTATGACTGTGTCAGATATGGACGATGGCTTCTTTTACGGAAGTGGG
TCACCTTGTTCTGAAAAAGCCGATTCCCCAGCACCTTCAGAATGCTCATCTGGTGTTTCA
TCAGCGTATTCCAACGTGGATAGGTACGAGGTATCAACACAACAACCTTTGGGCCCAATG
GATGAGGATGAACTTCTAGATGTACTGATGCACCGAAACACGTTTTGA
Protein sequence:
MLQEIQLVQGQTNYMVVSSGYPTSTVTKNTEKRILPISTGAEKNYVTHDTPPNLQYRKKV
HFRTNPYTGPQAVSIARRNARERNRVKQVNDGFNALRRHLPASVVAALSGGARRGSGKKL
SKVDTLRMVVEYIRYLQQLLDESDAALGITRDQENRENIPSGNQTMTVSDMDDGFFYGSG
SPCSEKADSPAPSECSSGVSSAYSNVDRYEVSTQQPLGPMDEDELLDVLMHRNTF