| New model in OGS2.0 | DPOGS207511 |
|---|---|
| Genomic Position | scaffold134:- 125988-137002 |
| See gene structure | |
| CDS Length | 3546 |
| Paired RNAseq reads | 6303 |
| Single RNAseq reads | 17286 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001935 (0.0) |
| Best Drosophila hit | dystroglycan, isoform A (4e-78) |
| Best Human hit | dystroglycan preproprotein (1e-26) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (8e-133) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (2e-111) |
| GeneOntology terms | GO:0008307 structural constituent of muscle GO:0016011 dystroglycan complex GO:0007016 cytoskeletal anchoring at plasma membrane GO:0016334 establishment or maintenance of polarity of follicular epithelium GO:0045197 establishment or maintenance of epithelial cell apical/basal polarity GO:0007314 oocyte anterior/posterior axis specification GO:0005509 calcium ion binding GO:0009925 basal plasma membrane GO:0016010 dystrophin-associated glycoprotein complex GO:0007295 growth of a germarium-derived egg chamber GO:0007163 establishment or maintenance of cell polarity GO:0046716 muscle cell homeostasis GO:0005515 protein binding GO:0030010 establishment of cell polarity GO:0007411 axon guidance GO:0007309 oocyte axis specification GO:0035088 establishment or maintenance of apical/basal cell polarity GO:0007474 imaginal disc-derived wing vein specification GO:0045214 sarcomere organization GO:0016203 muscle attachment GO:0030315 T-tubule GO:0060025 regulation of synaptic activity GO:0031594 neuromuscular junction |
| InterPro families | IPR015919 Cadherin-like IPR008465 Dystroglycan IPR006644 Dystroglycan-type cadherin-like IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL14631 |
Nucleotide sequence:
ATGGAGGGGTCGCGCTATATTGCTTGCGCGCTGCTCCTATTGAGTCCTCTAGCACTCAGC
CGACACGATGATGACTTCGCATTCGACAACAACGAAGAATTTCAGGTGGAATTGACAGCA
AATCATTCTGAGATAGCGAAAAATGGCCTAAGAAGGTTATGGGGCGTCCCCGACACATCG
GCCTACGTGGGACATCTATTCAGGATGGAAATCCCAAAGGAGGCCTTCACCGGGGACGTT
TTAGCATATAAGGTACGAAGGGAAGACGGTCGTCACTTACCAGGTTGGCTGGCTGTGGAT
ACTAAACACGGTCTGATCAGTGGCGTGCCACAGAAACAAGATCTCGGAGCACATAGTTTC
ACAGTTATAGCACAGGGAAGAACACACGGTCTCACAGCTACAGACACGTTCACTGTTGAG
GTAAAGAAAGCGGAGGAGAAGCCCCAATCGAAGTACGGCACGTGTGTCAGAAATGAAAAT
AGACTGGTATTGGTGATCCTGATAGACGGAGCCTTCCACAGGATCGCGCCGCGGCAAAGG
ATACGAGCTCTCATGGAACTAGCCAGTTTTATGGCTTTGGATGGTGATGAATTCTGGATG
GAGCCTTATAAGGCTGAGTCTGCACAGTCTCATGTAGTTCTGATGAGCGGGCCCGGGACC
ACGCAACGGAGGAAGAGTGACGCTACTACGGCTATTTATTTGAATGTTGGTTGTGGCGAG
AGGTTGTGGTCGCGTCATAAGGTCTTGGTTTCCGGTCTGAGGGAACAATCACGGGATGGG
ACCCTGCATCAGATATTACGTCTCCCGGTGTTAGGGTGGAGGCTGATTGCTGTTAAGACG
CTACCAAGGCTGAAAAGACAGTCTGACCTGGACGACGGGTCGGGCGCCTACGACACCTAC
GACGACGATGAAGGCGACTACAGCGGCTACGACGACGACGACGACTACGCCGCCGGACTC
GACGTAGGCGCCGTTCCCGACATCACCGAGCTCACCGACAACACGGCGATAACCGACTCC
CAACCCCCGACCGAACCCCCGACGACCCCCGAACTCCAACCCCCAATCCCCGCGTCCCCG
ATCCCCTCCACGCCAGCCGCGACGCTTGTGGAACACACGCTCACGGAGACCCCCGAAACA
GCCTCAACTAATACGTATACCACGGAGGATCACAAAGTTAAAATCACACCGTATTCTGAA
TCCGCGTCCGAGTCGACTCAAGTGAAGATGACGAAGGAACATTTGGCTAACATACCGAGA
CGACTAGACGAACATTCGCCCATAATAATTGTCCCAGAAGACATTCCGACGACAACTGAA
CCGGAAGAGTCCACCGTTATAATACAAGCGTCCAACGAACTACCGACATCAATGGAAACG
CCGACGTCACCGTCGTCTACAGAAGAAACGATTACTATACCAATATCCTCTACGTCTACT
ACGACGTCAACTATGACGCCTGAACCGACAACTGTTGAGACGACGTCGTCAACGACCACG
TCTACGACGTCAACTACGACGAGTACGACTACGCCTACGCCTACACCGACACCAATTACA
ATTTTGACGTCACCATCGACTACGCCAACTACAACGCCAATCGATTCCACCACACAGGAA
GTCACCAAGCAGGATACCATAACTTCAACGGAGCGTACCAGTACTATAGTTGGCAGAACA
ACAGAGACCGTTCCTTTCCCTATGCCGGTGAATCAGCCGCCGACACTCAAACATCACATG
AAAAAACTAGCCATTACAGCCGGAAAGGCCTTCAGATACATTATACCAGCCGATCTATTC
ACTGATCCTGAAGAAGGCAGCAACTTAACGTTTAGGATGTACGAAGAGGAAAATGTACCA
CTTAACAAGAACTCCTGGATACAGTTCCTACCATCCGAACGAGAGGTCTATGGATTACCA
CTAGAAGCGCACGTGTCTCGCTGGAACTTCATAGTAGAAGCTCAGGACAGCGAAGGTCTC
GTGGCCAGGGGACCTCTGGACATTACGGTGCAACAGCACAAGAGCGGCAGAACTATCAAC
CACCAGTTCATAATGAAGATGAAGTTACAGAAGAATTACAACAACGCCGTGGACTGGCAG
ATACGAGCCTTAGAGGGCATCGTGAACCTGTTCAGGGACACCGACATGGATCACCTCACT
GTACTGAACACCACGCAGAACGGAGATCTGTATGAATTCGTGTGGACCAACGACACCCTG
CCCAAGGATCCCGCCTGCCCCATGGATGATATCAACAGGCTTATGAAGATAATGGTATCT
GAGCCGGAGTCAGGCAGCCCGTCCCCTAGTCTGTCTCGAGCGATGTTCCCAGACATGAAG
GTGTCGGAAGTGAGGTGGAGGGGCGCAGGCCGATGTGTTCCCCCCTCCACACGCGCTCAC
GACACTTACCCCCCGGTCACTAGGAACCAGGTGGATCATCTCACAGCTACAGTTGGACAT
CTACTACTGTATAAAGTGCCAGAGGACACATTCTTCGACCCGGAGGACGGTGGTACTCGT
AACCTTCAGCTGTCGCTCAGGTTCAGCGACCGCTCAGAGATCCCTTCGAACCACTGGTTG
CAGTTCGATGCACGAAACCAGGAATTCTACGGCCTGCCCGGGCCTGGGGATGAGAAGATT
GTACATTATCAGCTGATCGCGGAAGACTCTAGTAAGAAGAGTGCGTACGACAGTCTCATA
GTGGAAGTAGCTAAGGCGCCGACCATACGACCGACCGTCGAGTTCCAGATGACAATGGAC
CCGTCGCCACTTGCGGATAGCGCCACCAACAAGAGGAAGGTTGTCGAGAAGTTGGCGGCG
CTGTTCGGACAGACCGACACAGACAATATACGCATACAGAGCATCACAGACAACCCCACC
ACTATTGTATGGTACAATACCAGTCTGCCAATGGACAGATGTCCCAAACGGGAAATTGAG
GAGCTACGAAGGATGATAATAGCCGACGAACGGGGATCTGTCGGCGGAAACCTCAAAGAG
CACGTCGACCAGATATTCGACAAAGACTTAAAGGTTATGTCCATACGGCTCATACCATTG
GGACTTTGCGCGGAACAGAATACGAAGACACCCAAAACAATGGCGCCCTCTCACGGCCCG
AATCTACAGAACAAGGCTACTAACGCCTCCCCCGAATACTCGGACTATTTGGTCACGTTC
GTGGTACCAGCCGTCGTCATCGTCTGCATGATCGTGGTAGCGGCCATCATCGCTTGCGTA
CTGTACAAGAGACGGCGAACAGGTAAAATGAGCGTTGGCGACGAAGAAGAGCGTCAGGCG
TTCAGATCTAAAGGGATCCCTGTGATCTTCCAAGACGAACTCGAAGAGAGAGTCGAAACT
GAGCCGGGGGATAAGAGTCCTGTCATCATGAGAGAGGAAAAGCCACCCTTACTGCCGCCG
ACGCCAGATTATCGTAATGAAGACGCACCTTACCGGCCTCCGCCGCCCTTCGCAGCCTCG
CGCACCCCCCCGCGACCTAAAGCGACCCCCACTTATAGAAAACCACCCCCCTACGTACCG
CCCTAA
Protein sequence:
MEGSRYIACALLLLSPLALSRHDDDFAFDNNEEFQVELTANHSEIAKNGLRRLWGVPDTS
AYVGHLFRMEIPKEAFTGDVLAYKVRREDGRHLPGWLAVDTKHGLISGVPQKQDLGAHSF
TVIAQGRTHGLTATDTFTVEVKKAEEKPQSKYGTCVRNENRLVLVILIDGAFHRIAPRQR
IRALMELASFMALDGDEFWMEPYKAESAQSHVVLMSGPGTTQRRKSDATTAIYLNVGCGE
RLWSRHKVLVSGLREQSRDGTLHQILRLPVLGWRLIAVKTLPRLKRQSDLDDGSGAYDTY
DDDEGDYSGYDDDDDYAAGLDVGAVPDITELTDNTAITDSQPPTEPPTTPELQPPIPASP
IPSTPAATLVEHTLTETPETASTNTYTTEDHKVKITPYSESASESTQVKMTKEHLANIPR
RLDEHSPIIIVPEDIPTTTEPEESTVIIQASNELPTSMETPTSPSSTEETITIPISSTST
TTSTMTPEPTTVETTSSTTTSTTSTTTSTTTPTPTPTPITILTSPSTTPTTTPIDSTTQE
VTKQDTITSTERTSTIVGRTTETVPFPMPVNQPPTLKHHMKKLAITAGKAFRYIIPADLF
TDPEEGSNLTFRMYEEENVPLNKNSWIQFLPSEREVYGLPLEAHVSRWNFIVEAQDSEGL
VARGPLDITVQQHKSGRTINHQFIMKMKLQKNYNNAVDWQIRALEGIVNLFRDTDMDHLT
VLNTTQNGDLYEFVWTNDTLPKDPACPMDDINRLMKIMVSEPESGSPSPSLSRAMFPDMK
VSEVRWRGAGRCVPPSTRAHDTYPPVTRNQVDHLTATVGHLLLYKVPEDTFFDPEDGGTR
NLQLSLRFSDRSEIPSNHWLQFDARNQEFYGLPGPGDEKIVHYQLIAEDSSKKSAYDSLI
VEVAKAPTIRPTVEFQMTMDPSPLADSATNKRKVVEKLAALFGQTDTDNIRIQSITDNPT
TIVWYNTSLPMDRCPKREIEELRRMIIADERGSVGGNLKEHVDQIFDKDLKVMSIRLIPL
GLCAEQNTKTPKTMAPSHGPNLQNKATNASPEYSDYLVTFVVPAVVIVCMIVVAAIIACV
LYKRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERVETEPGDKSPVIMREEKPPLLPP
TPDYRNEDAPYRPPPPFAASRTPPRPKATPTYRKPPPYVPP