| New model in OGS2.0 | DPOGS207519 |
|---|---|
| Genomic Position | scaffold134:- 35228-37204 |
| See gene structure | |
| CDS Length | 849 |
| Paired RNAseq reads | 495 |
| Single RNAseq reads | 1319 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001940 (1e-110) |
| Best Drosophila hit | CG15440 (5e-80) |
| Best Human hit | tRNA selenocysteine 1-associated protein 1 (3e-42) |
| Best NR hit (blastp) | tRNA selenocysteine associated protein (secp43) [Aedes aegypti] (5e-99) |
| Best NR hit (blastx) | tRNA selenocysteine 1-associated protein 1 [Bombyx mori] (4e-90) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL15526 |
Nucleotide sequence:
ATGGGCAGTCTGGAGCCGAACATGACGGAAAGTTTTATATTAGCAGCTTTTCACCGAATG
GGGCAGCGGCCGTTGGCTGTTAAAGTTATGAGAAACAAATTTACCGGAGAACCGGCGGGA
TATGCTTTTGTACATTTTCAGACTGATGAAGAGGCTATAGATACAATGCACAAATTAAAT
GGTAAACCTATACCTGGCACATTTCCTGTGGTAAGATTCAGACTCAACACAGCATCAAGA
GAGGCAAGAGCTAATATGCAACAGGAAAGAGAATTTTCTGTGTGGGTCGGAGACCTTAGT
GCAGATGTTGATGACTACTCATTGTATAGGGTGTTTGCCGCCAAATACTCTTCTATAAAA
ACAGCTAAGGTTATACTTGATAGTTCCGGTTATACAAAAGGTTATGGATTTGTGCGTTTT
GGTAATGAAGATGAACAAAGAAATGCACTCTATGCTATGAACGGCTACACGGGATTAGGT
TCAAAGCCACTAAAAATTTGTACCGCTGTACCTAAACCTAAAGGTGCTGTCACAACTCAG
AGCCCTACTCCAGCAACAGCAACGGCAACATATAGCAGTAGCACCGACTACAGTCATTAT
TACGATCCATCAGCGTACTGGCAGAACTATTCCGCTTGGTCGGGATATTATGGACAGGAT
GCCAGCGCTGTGGTACAGGAAGCGGCTCCAGCTGTTAAAGCCCAGGTCGATGAACTGGCT
TTGATAGATCACAAGAAAGTACTGGATGTTGATCAGATGAACCAGGAGTTTCTCGATACA
GATTTATCCTTATGGGATTCCCTAGAAGCATCACAGTGGTTCCCTCATGAAATCATAGAA
GCCTCTTAG
Protein sequence:
MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN
GKPIPGTFPVVRFRLNTASREARANMQQEREFSVWVGDLSADVDDYSLYRVFAAKYSSIK
TAKVILDSSGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPKPKGAVTTQ
SPTPATATATYSSSTDYSHYYDPSAYWQNYSAWSGYYGQDASAVVQEAAPAVKAQVDELA
LIDHKKVLDVDQMNQEFLDTDLSLWDSLEASQWFPHEIIEAS