| New model in OGS2.0 | DPOGS207523 |
|---|---|
| Genomic Position | scaffold134:+ 38299-39714 |
| See gene structure | |
| CDS Length | 1416 |
| Paired RNAseq reads | 441 |
| Single RNAseq reads | 1249 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001885 (5e-140) |
| Best Drosophila hit | Zyx102EF, isoform C (4e-89) |
| Best Human hit | lipoma-preferred partner isoform a (6e-75) |
| Best NR hit (blastp) | PREDICTED: similar to lipoma preferred partner/lpp [Tribolium castaneum] (9e-118) |
| Best NR hit (blastx) | lipoma preferred partner/lpp [Aedes aegypti] (3e-115) |
| GeneOntology terms | GO:0005856 cytoskeleton GO:0008270 zinc ion binding |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | MCL14644 |
Nucleotide sequence:
ATGTCACGATTAGATAATGTGGATGCACTTGAAAAACAGCTAGCTGAGTTGCAAATGGTG
AAAAATATAAGTTCACCAGGAAAAGTGAAGAAGATACCACCAGCTGTGCCACCTAAGAAG
AAAGCGCAACCCCAAGTTCCCCACAGTGCAGCTATCACTGCTATAAAAGAACCTTCATAT
TCGTCTAAGATTGCACCACTACAGAACAATGTTGTGCCACCTCCACCACCAACTTATGGC
AATGTTCCAAGATTTATGAATAATGTTCATTCATCACATAAAGATTATGCCAATGTGAAA
CAACTAGCTTTGCCTAGTCATCCAGTTAAACAAACTCTACCGCTGCCACCTAAATCTATC
AATCCTCTGAATTATACCAACTTGCCAACATATCAAGGCTGCCCACCACCCCCTCCTCCA
CCCCCCTTTTACATGGCGCAGTCAAAAGCTCTAGATTCAAACCATAATAATGAGGAATAC
CTACCTCCACCATCACCTGTCAGTTCAAACTACAGTGAATTAATGCAAGCAACTGCTAAC
ATAAATTATAATCAGGACCGACAATCATATCCAGCGATATATCAGAATGACTACCCCGAG
TACGGAGTGTCACAAGCTTCAACTTATGAATCACTTTATGAACCCATTAATCCTCATCCA
ACAAGTACGAGACAAACCAATAACAATAGAGAATTTAAAGGCAACATTCAGCCAAATAAA
GGAAAATCTCCATTGGCTAAGGAGGAAGAAGTTGATGCACTGACAAACCTTTTGGTTCAA
TCTATAACTGATAGTCAGGATTTGGATGTCTTTGGCACATGTGTCAAATGTAATCAAAAG
GTGATTGGGGAGAGTTCGGGTTGCACTGCAATGGGTAACATGTATCATATCCAATGTTTC
AGCTGCCACAGATGCAATGTCAATTTAAGAGGTAAACCGTTTTATGCCGTCGAAGGAAAT
CCTTATTGCGAGACAGATTACTATGAAACTCTTGAGAAATGTTCAGTTTGCGAGAATCCA
ATTCTAGACAGAATTTTGAGAGCAACTGGCAAACCTTATCACCCGTCTTGCTTTACCTGT
GTTGTATGCGGTAAGAGCCTTGAAGGTATACCATTTACAGTGGATGCAATGAATCAAATA
CATTGTATTGAGGATTTTCACAAAAAATTTGCTCCTCGCTGTTGTGTTTGCGAGTTGCCG
ATAATGCCTGAAGAGGATAAAGAGGAAACGGTAAGAGTTGTTGCTGCAGATCGTAGTTTC
CATGTCCTGTGTTACAAATGTGAGGATTGTGGCCTGTTACTCTCAGCTCAAGCCGAAGGT
CGTAAGTGCTATCCACTCGATGGGCACATCTTGTGTAGAGCTTGTAACGCTCATCGCATT
CGCCTTTTGACCAACGTTATGACTACTGATCTTTAA
Protein sequence:
MSRLDNVDALEKQLAELQMVKNISSPGKVKKIPPAVPPKKKAQPQVPHSAAITAIKEPSY
SSKIAPLQNNVVPPPPPTYGNVPRFMNNVHSSHKDYANVKQLALPSHPVKQTLPLPPKSI
NPLNYTNLPTYQGCPPPPPPPPFYMAQSKALDSNHNNEEYLPPPSPVSSNYSELMQATAN
INYNQDRQSYPAIYQNDYPEYGVSQASTYESLYEPINPHPTSTRQTNNNREFKGNIQPNK
GKSPLAKEEEVDALTNLLVQSITDSQDLDVFGTCVKCNQKVIGESSGCTAMGNMYHIQCF
SCHRCNVNLRGKPFYAVEGNPYCETDYYETLEKCSVCENPILDRILRATGKPYHPSCFTC
VVCGKSLEGIPFTVDAMNQIHCIEDFHKKFAPRCCVCELPIMPEEDKEETVRVVAADRSF
HVLCYKCEDCGLLLSAQAEGRKCYPLDGHILCRACNAHRIRLLTNVMTTDL