| New model in OGS2.0 | DPOGS200402 |
|---|---|
| Genomic Position | scaffold1611:- 75593-78877 |
| See gene structure | |
| CDS Length | 1416 |
| Paired RNAseq reads | 9 |
| Single RNAseq reads | 28 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008979 (3e-76) |
| Best Drosophila hit | CG10809, isoform B (7e-08) |
| Best Human hit | neurogenic locus notch homolog protein 1 preproprotein (1e-09) |
| Best NR hit (blastp) | PREDICTED: similar to Ank2 CG7462-PC, isoform C [Apis mellifera] (2e-17) |
| Best NR hit (blastx) | PREDICTED: similar to Ank2 CG7462-PC, isoform C [Apis mellifera] (3e-18) |
| GeneOntology terms | GO:0005242 inward rectifier potassium channel activity GO:0030551 cyclic nucleotide binding GO:0005886 plasma membrane GO:0006813 potassium ion transport GO:0048767 root hair elongation GO:0009651 response to salt stress |
| InterPro families | IPR020683 Ankyrin repeat-containing domain IPR002110 Ankyrin repeat IPR006034 Asparaginase/glutaminase |
| Orthology group | MCL40357 |
Nucleotide sequence:
ATGGAAAGTGATCCCGACCCTATACTAAGTAGAACATCGGAAAATATCTCTCTACAAAGC
AATATTGCATCTGGAAACAGTTCTGTTACTACTGAAGATGTCGAAAACACGAAAAGCAAT
ACTAAAGATGACATCAGCTTACAATGTACATCAACCCAAAACCACACAAACACAAACGTG
GACAGAGAACCAGTTTTTGTATTAGTGGACTCAAGATGTGTAAGCAGTCCCAGCTCCAGG
GAAATCCTTATTAATAAAATAAACGTTGCACAAGATTCGACTAACAAGAGTCCGAAAAAT
AAGGTCATACATGTCGATACTCCTTGCACAAGCACAGCATATGCGGAATATATAACGATC
CAAAGTCGGACATCCGATTCCATTGATGAATTGGAAATGATTGATATAAATTTACAAAGC
GACAATGAAATTCCCATCGATACAAAACCAGATTCAATTGTTGTGGCATATTTACGAGAT
AAAAGCGAAGTCATAGATAAAGATGAACCAAGTTCGTCTAAAAAAATGTCGTTGCTCGAT
AACCTATCCAAAATGGAAACAATACCGGAAACTGAGCGGCTTTCTACATTTTCAATTCCA
TCAAATTCAAGACATGAAAGTATATCAGAAACCTCGTTGGATGTACACATACCTTCATAT
CCTGGGTCACCTCGATCTATTGACTTCAACTCAAGTAGTTCAATAGAATCCATAACCGTG
CGTAACCCACAATTAAGAGACGCTATTGAGTTTCTGCATCAGGACAAGGAATTTCTTATA
GCTGCTGAAACGGGAAATGATAAGCTCCTTGCAAAGTATATAAAACAGGGAACTGACATA
CATCAATTCGATCACATCGGAAGAAGTGCTTTACACTTGGCAGTCTGCTCTGATAACACG
AATGCTGTCAAAATGCTGCTGGAAGCTGGTCTTAATCCAAATATTAAAGATAATTTAGGG
ATGACTCCACTTTCGCTATCTTTGATGAGGAGGCCATCCACTGTTGTAGCTAATCTTCTT
TTCGACCACGGAGCAGTGTTGATGCCACGAACAGACCCGATGGACACCGGCTTATTTATT
CAATTTGTAATGATGTGCACACCCACATCTGAAGAAGAGAATATTCTACGACTACTTGTA
GATAAAGGGGCTGTAATAAATGATACTGACGCTCCGGGACAGCGACAAGCCCTCCATTTT
GCGGCTATGAGCAATAACGTGAACTTAATCCGCATTTTAGTGGGCCTGGGTGCGGATTTG
TATTTGAAAAATCATAGAGGAGAAACGCCAAAAGACGTAGCCGAAATATTTCATTGTAGG
GAAGCATTTGACTTACTGAACTATCTTGAAGAAATCGAAGAAGTAGCAATAACCGCTAAT
TCGAATACTTTACTGTTTGAAATCCCTGAAAAATAA
Protein sequence:
MESDPDPILSRTSENISLQSNIASGNSSVTTEDVENTKSNTKDDISLQCTSTQNHTNTNV
DREPVFVLVDSRCVSSPSSREILINKINVAQDSTNKSPKNKVIHVDTPCTSTAYAEYITI
QSRTSDSIDELEMIDINLQSDNEIPIDTKPDSIVVAYLRDKSEVIDKDEPSSSKKMSLLD
NLSKMETIPETERLSTFSIPSNSRHESISETSLDVHIPSYPGSPRSIDFNSSSSIESITV
RNPQLRDAIEFLHQDKEFLIAAETGNDKLLAKYIKQGTDIHQFDHIGRSALHLAVCSDNT
NAVKMLLEAGLNPNIKDNLGMTPLSLSLMRRPSTVVANLLFDHGAVLMPRTDPMDTGLFI
QFVMMCTPTSEEENILRLLVDKGAVINDTDAPGQRQALHFAAMSNNVNLIRILVGLGADL
YLKNHRGETPKDVAEIFHCREAFDLLNYLEEIEEVAITANSNTLLFEIPEK