| New model in OGS2.0 | DPOGS201743 |
|---|---|
| Genomic Position | scaffold115:- 111343-123180 |
| See gene structure | |
| CDS Length | 2892 |
| Paired RNAseq reads | 3454 |
| Single RNAseq reads | 8466 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002643 (0.0) |
| Best Drosophila hit | CG8709, isoform B (2e-125) |
| Best Human hit | phosphatidate phosphatase LPIN3 (2e-78) |
| Best NR hit (blastp) | lipin-3 [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG8709-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0006629 lipid metabolic process GO:0006631 fatty acid metabolic process GO:0008195 phosphatidate phosphatase activity GO:0016787 hydrolase activity |
| InterPro families | IPR023214 HAD-like domain IPR013209 LNS2, Lipin/Ned1/Smp2 IPR007651 Lipin, N-terminal |
| Orthology group | MCL10942 |
Nucleotide sequence:
ATGTATTCCATGAACTATATCGGTAAATTCATTGCTCAGTTCTGCGAGTTCTATAATGAG
ATCAACGGTGCGACCCTGACAGGTGCGATTGACGTCGTGGTGGTAGAACAGCCAGACGGA
AGCTTCACCTGTTCCCCGTTCCATGTGCGGTTCGGAAAACTCGGTGTGCTAAGATCGAGA
TTCAAAGTTGTCGATTTGGAGTTGAACGGCGAACCGCTACAGATTCACATGAAATTGGGT
GAATCTGGCGAGGCGTTCTTCGTAGAGGAAGTCGGGGAGGATGAGGCTGAGTGTTCCGCA
CATCTGGCTACATCACCCATACCGGCTACCAGATTCGACGAACTATACGAGCCGCGACGC
AGGAACTCGCTGTCAGCTGTGGAACCAGACCATGGACAGGCTTCAGATTATACAAAGAGA
AGATACACCGCCGACGGGAAATCCATGCAAAAACCGGACTTAAATAAACTTGCCAAAAAA
AGAGAAGACAAAAATAATCATGACGATCATGATAATGAAGCTTTGTTTGAAATGGATGGC
TTGAATGATGGATCAGCTGACTGGACAGACTCGAAACCAAAGACATTCTCGGCCACTAAG
CTCGGCTCAGCCGAGAGCGAGGCCAGCCAAACCGTTCAGAAGATAAGTGAACACAATGAC
TTCAGACCCATAGACGCCATGCCTAATCCAGAAGAAGTCAAGCCGAACGGCAACGGCAAG
AAGAAAAAGAAGACGAGGAAGGCCAATTCAAAGAAGAAACACCAAAGAAAGTCATCGACT
AGCTCCATATCTAGTCAGTCAGATCTCACCGGGACCGAGCAGAGGTCACGTGTTATCACA
ACAGATATAAATTTCTTCAGTGACAGCGAAGTGGCAGCGAGCGCTCTAAGCGAAGAGATG
TCCAACTTCAAGCTGAATGGTGACAATCGTATCCCGCTAGCGTTGTCGGACACGGCCTTC
GAGGTCCACGCAGCATCCAGACACTCTAAGGGATCCCGACATGGATCGCCGGTTCAATCT
GATACGGAGGTGGAATTGGCACGAGCTACTAACGACGATAAGTCATCACAGTCGTGGAGG
TGGGGTGAACTGCCGGAGCCTCCAGTGAGAGGGGCTCAGGCTGCGGAGTCCCCTGCCTCC
CCCGCCTCTCCAGCTTCCCCCGCCGAGCCCTCCTCGCCAGCGGAACCTCTCAGCTCGGAC
GAAGAAAGAACAGGACGTCGCGGAGTGCTGAGCGACATGTTCAGATTCATGTCGACCAGA
GAGGACGCCGTCCCCGAAGGCGTCTATTTAGATGATTTGGACCGTGGCCAGGTCGACCCG
GACCTTTACTTCCCGAAACATCACGCTGAGCGTTACCGATCGGGTGTGGCGGCGGCCGGA
CCTACGGAGGAGGAGTACGAGTCCGGCAACGGTCCGTCCTTACCGCAGTCACCGAACTCA
CCAGCCTCCATGGACGCACCCGCGCTGGACTCGGATGACGATGAGAAATTGCTTGCCAAA
GGTCAGGTGTCTGTGATGGCTCGTGATGGCGCTGTGTGCCGCTCACTGAGCTACGAGGAG
TTCTGTGTGAATGGCGCTGAGCTAGCAAGCGCTGGCAGGCTGGAGGTCCGTCTTGGGACT
AGACGATTGCCGTGGCGCAGCGCTGGACCGCTATTGCTGTCGTTGTTGGCGTACAGACGA
CCGCTGCCCAATCGTGTACTGGAGGAACTAGAGAAGGGTCAGAAGGAGGAGTCGGCCATC
AGAACGGATGAGGTGAAGCCGAGGAGTTACTGGTGGAGCTGGAGACGATCCAACGACAAG
AGTAGATCAGAATCGTCTCAGAACAAGGACGAAGAACTGAAAGATTCGTCCATACAACAA
ACCGAGACCCTAAAAATTGAAGCAACCGATATTGATGAGGTGGACCATCAGTGGAGCGAA
GAGAAGACGGAACCCAAGGAGGAGACACCGATCGATGATGAACCGATGCCTGAAATCATC
ACGGAACCATTGGAAACCACGCCCGTGTTGCCGAAAGTGTCAATATCGCCGAGCCAGCCA
GAGCACAGCTCGTCGGAGTCGGAGACGGAAGGACGAACGGCCACGAGGAGACCTTCTTCC
TTCAGGAAGACACTCCGATTGTCTTCGGATCAGATCAAAAACCTGAACCTCCGCGAGGGT
ATGAACGAGATGGTGTTCAGTGTGACCACCGCCTACCAGGGCACTACCAAGTGTAAATGC
AACGTGTTCCGCTGGAGATACGACGACAAGATCGTCATATCAGACATAGACGGCACCATC
ACCAAGTCGGATGTTCTGGGACACATCTTCCCACTGGTGGGCAAAGACTGGGCTCAGTCG
GGCGTCGCGCAACTATTCACTAAGATCAAAAACAACGGATACCAGTTATTGTACCTCTCG
GCGAGGGCCATCGGACAGGCCAAGGTAACTCGCGAATATCTTCGTTCGATCCGTCAAGGC
GAGTTGTGTCTGCCGGACGGACCACTTTTGTTGAACCCCACATCGCTGCTGCGCGCCTTC
CACAGGGAGGTCATCGAGAAAAAACCGGAAGAGTTCAAGATACAGTGTCTGGCTGACATC
AAAGCGTTATTCCCCGCTGGCTCTAATCCCTTCTATGCGGGTTACGGAAATAGAGTCAAC
GACGTCTGCGCTTACCAGGCTGTCGGCATTCCTATCGTGAGAATATTCACAATAAACTAC
AAGGGTGAACTCAAACACGAGTTGACTCAGACATTCCAATCGACGTACTCGCACATGTCT
GTGCTAGTGGACCAGGTGTTCCCGCCCGCGCTTTGTGAACCCAGCGATGAATTCTCTCAG
AGCGTCTTCTGGCGCGAACCGCTGCCCACTGTTGAACTTCCCGCCGCCGTGCTACCACCG
ACAAAACATTAG
Protein sequence:
MYSMNYIGKFIAQFCEFYNEINGATLTGAIDVVVVEQPDGSFTCSPFHVRFGKLGVLRSR
FKVVDLELNGEPLQIHMKLGESGEAFFVEEVGEDEAECSAHLATSPIPATRFDELYEPRR
RNSLSAVEPDHGQASDYTKRRYTADGKSMQKPDLNKLAKKREDKNNHDDHDNEALFEMDG
LNDGSADWTDSKPKTFSATKLGSAESEASQTVQKISEHNDFRPIDAMPNPEEVKPNGNGK
KKKKTRKANSKKKHQRKSSTSSISSQSDLTGTEQRSRVITTDINFFSDSEVAASALSEEM
SNFKLNGDNRIPLALSDTAFEVHAASRHSKGSRHGSPVQSDTEVELARATNDDKSSQSWR
WGELPEPPVRGAQAAESPASPASPASPAEPSSPAEPLSSDEERTGRRGVLSDMFRFMSTR
EDAVPEGVYLDDLDRGQVDPDLYFPKHHAERYRSGVAAAGPTEEEYESGNGPSLPQSPNS
PASMDAPALDSDDDEKLLAKGQVSVMARDGAVCRSLSYEEFCVNGAELASAGRLEVRLGT
RRLPWRSAGPLLLSLLAYRRPLPNRVLEELEKGQKEESAIRTDEVKPRSYWWSWRRSNDK
SRSESSQNKDEELKDSSIQQTETLKIEATDIDEVDHQWSEEKTEPKEETPIDDEPMPEII
TEPLETTPVLPKVSISPSQPEHSSSESETEGRTATRRPSSFRKTLRLSSDQIKNLNLREG
MNEMVFSVTTAYQGTTKCKCNVFRWRYDDKIVISDIDGTITKSDVLGHIFPLVGKDWAQS
GVAQLFTKIKNNGYQLLYLSARAIGQAKVTREYLRSIRQGELCLPDGPLLLNPTSLLRAF
HREVIEKKPEEFKIQCLADIKALFPAGSNPFYAGYGNRVNDVCAYQAVGIPIVRIFTINY
KGELKHELTQTFQSTYSHMSVLVDQVFPPALCEPSDEFSQSVFWREPLPTVELPAAVLPP
TKH