| Genomic Position | scaffold115:- 50450-55411 |
|---|---|
| See gene structure | |
| CDS Length | 4803 |
| Paired RNAseq reads | 860 |
| Single RNAseq reads | 2138 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002655 (7e-177) |
| Best Drosophila hit | rough deal (2e-22) |
| Best Human hit | kinetochore-associated protein 1 (2e-18) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC005217 [Tribolium castaneum] (6e-32) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC005217 [Tribolium castaneum] (2e-34) |
| GeneOntology terms | GO:0000776 kinetochore GO:0005828 kinetochore microtubule GO:0007094 mitotic cell cycle spindle assembly checkpoint GO:0000940 outer kinetochore of condensed chromosome GO:0000070 mitotic sister chromatid segregation GO:0005737 cytoplasm GO:0005819 spindle |
| InterPro families | IPR019527 RZZ complex, subunit KNTC1/ROD, C-terminal |
| Orthology group | MCL16251 |
Nucleotide sequence:
ATGATGGTGATGAATAAAAGTTTTGAATTGATATTTCAATTTGATAAAAATAATTCTAAT
TATCACCCTATGTCAGCTAATAAGGGAATATTCTACTACTTGAAATGGATAAATCAAGAG
GTGGAAATTTATAGTGCTTCTTTGGAGTGTCATGAAGAGCAACAGGAGGAAGAGAAAATT
GGAAATAAATTAAAAACATCAAACGATTTATTGAAACTTCAACTAACCAACTTTGTTGAT
GAAATAATTATAAATACCACTAAACCTGCTGAAGTACTACCACAACTGCATCAGATGTTT
CACAACCTAGATGATAACAGGTTTCTTGTGAGTGTCGCCAAAAAGCTCTGTAACCATAAC
TTACTATATAAACCAATATTGTATCCTCTACAGAAAAGAATTTATCTCACAGAAGACAAA
TCTCTAATTGACTTTATATGTGATGTCGTTATAAAGAGTGATCTTCTTGAATACATCTGT
TTCAGAGGTGGCAGTAGCTATGATAATGTTAATATATTTGAAATGAATTTCATACAATTG
TGCATAACATTTATTTCCAAATCGGATTTAGACTTAGCATCTATATGTTGGTTAAAATAT
TCAGAGATGAGATTAACATTGACTGCGGATGATGTTGTTGAAATACTAAATTCTATACCT
TATAATATAAAAATTGGAGCTCTTGTAATATGGTTTCGGAACTTTGTACCACCCGTTTTA
GAACAGAATGTATTTTATGTCGACTTGTTTGTAAAGTGGACTACTGATAGAATTTTCCTC
TTGGAGCAGTCATCTTATTGGCCAAAGATTGGTTTAAAATTTCTTGCTTCAATAATTGAA
GTACTCGAGACATCCATAAGAACTGTCTATATAAGATCTATCTCTATCGATGATTTGGAT
AAACTCCAAGATCATATAATTTACATATCGGAACTCAAAGAAAAATACAAAATCAACATG
CTACTCAGCGAGTTCAGCTCTCAGAGTCCTTCGGAAATTGCTCTTATAATGTTGCGTCGC
TGTTATACAGAAGATTTGGAAGCTTTTGTTTCTGAGAGTTTGCCGAAATATGTTTCACGA
CATTTACTAGAAATGGATGAGACTTTAAGATCCTTCATAGATAGTGAAGCTGCCAGCAGC
GGCGGCAGCATCGACGGACCGCGTCTTAAGATCTTGCTTAGTGCATTTAAAGCACCATGC
AACAAATTGGATTGTTTGCTAAATGTGCTTAAAATCTTAGACGTACCGTGGGATACCACA
GTACTTACAATAGCTACTGAAGCAGCTTCCTTAGTGAACAAAGATTTTACTATCACCGAC
TCGGATCGCGTAATTGCACAAGAGATATACAAGGAATTGAACTATGCCAAAATTAAAGTT
ATTTTAAAAAAATACAATTTTCCCCTCACGTGTACCGATTACAGGCTTGTATTGCATAAG
GTCATAAGTTCTCCAACTGTTGATTTGGAGGACCTAGACATATTCACAAATATACTAACG
ACCTATACTCATTATGCGTGTATTATGTATATAGACAGATGTCTTCAAGATTGTGAGACG
AAAAAAGCACTGAATTATTTCAAGAATATCAATAATCGTAATAAAAGGATGATCGTAAAG
GCAATATTATCAAAATTTGAACAAATAATTAGCAGTGGAAAAGTAAATCAACTATTGGAA
AAAAATTACATAGATTTTCTAAAAGGGACACAACTGTTAAATATAATACAAATCAATTCC
ATTGAAAATTTGTACCATCTCAAAAATTCGTATAACATCAAGCTAAATTTAAACGAAATT
AATAGTAACAGTTTTAAGGAGAGCACATTACAAAGTTTAAAAGATAATGAAGAAATATTA
TCATCGAGTTTAGGGCGCGGAAGGTGCATTTCCCAACTTATTAGTAAAGATTTATCCAGA
AAGTCCCAATTAATCTGTCTACTACGAGGAATATCTTCCAGTCGAACTATAAGGATGCAT
GTTGAATCTTTAATGTTATCTGATAAAAATGAAACATCTGACCTTATTAAATATAAAGAT
GGACAAAACAGTAATATTTTATTGGAATCACACAATATTCTGTCGGAGGTGTCCATTAAC
TGCAATGAAGAGGATATTCACGAAGTACTAAAAAGTCTTTCAACGTTGAATGCCTTGATA
AATGCTAGTACAATTCTGAAGAACCTCTCAGTGGCATGGAAGTTTCAATACATATTTTTA
CCTATGTCTACAATTCACGCCCTGAATGATTTGATCAATATCTATTCTTATTCGTCGCAA
ATGATATCAGTTGAAGAATTTTTGCATATCGCTTCTAAAGGAGAATTTATAATATTTAGA
ATAATTGCAAATATGATACAAAAATCACTGGGAAACAAAACCTCGTTGTGTGATAAAATT
GTTAAAGCGAGGGATAAGGTCACAAAAAGAATGTTAGCCAAGATTGTTTCTCTACAAGAC
CTGGATCAAGTATTGATCACTTCGTTTTTGCTTACCCTTAGAACTACAGCATGTGAAGAC
AAAATGTGGATTCTGGAACTGCTTAAGGGCCAATCAGATTCTCTTTCACCATCTGCAATG
CACTATCTTTCTTCTCCGTCTATCCGTCGTATTTTTGCTATTGATGATATTTTACCTGGA
AATAATATGTCTTATCCCCCACAATACATCCTAAAGTCCAAGTTTAACATCAATTTATCT
GAAGTAGCTCTCCCAGAAAACGAAGAAACATGGGACGTACAAGTCTTACTTTTCTATATT
TTGCGAAGATATCCCAATATTAATTTCAGTCGTCTCATAGAGTTATGTCAAACTTTAAAT
ATAAATCCAAATGAGGGAGTCTCTCTACTATTGATATCTGTATTGTCAACTTGGGATCTC
AAGTACAAAATATATGAAAACGAATTAGGCTATCGTCAAATACTCACTGAGCATGATCAA
ACGCAATTAATGTCACAATGTTTTGTGATTTGGCACAGTATAAAAGACAAGGATTTTATA
AGAAAAATTTGTACTGACTTATGGAAGACCGGCGAAGCTTTGGTACATGGTTGTCACGTG
TCCATTAATCCTTATTTTTATGAAGTATATATATGTATCTACCACTTAGTCTTCAGTTCA
CCAACAGACACTAAATATTTGAAGGAATACTATATACTTAATTTTCTTAAAGGATATCAA
AGAAAAAGCATTCCTAAACAATACGAATTTGAGCTATTCTCAATTAAAGGAATATTTCCA
GAGATAGGATATTACCGCTTACCATTACACCTTTTCATGCGGGATGACATGTGGTCAAAT
TTAAAATCTGAAATAACTTTAGAAACTTACGAGTCTTGGTTGCCTATTGTTTCATTACTG
TCACTGGACGGTGATTTACAGACGGCGCGGGATATGATATGCAGCAACGCCGTTAAACAA
ACTATGACAAATCGAAAACGAGCAGATAGTAATGAAGCTGATTTAAAAGATGAGCCTTGG
CGCTTGACGTCACAAGAAGAACCATTACTGCGAACAGCTCATCGGTGTGTAAGACATATA
GCAAATATGGAGTGGGCAGGCGCTTGTCTGTTCTATGCTCTTCAAGGTTGTGCTAGAGGC
GCTGATCAAGTAGCAGCTGCACAGCTATGTTATCAATTTTCACAACGTTGGGCAACTCTT
CAACCCGGCAATCGTGCTGTTCGACAAATGGAAAAACTTCACTCTTCATTATCAACCCGT
CACGTCTTATACAAGATTGAATGGGCGTGCGAAGAACTTATCCGGCTCTCAACAGAGCCT
GTACAATTGATTAATGCTTTATATCTTCACCCAAAATTTGTCGAAAAAATTACTCGTCAC
GATATAAACCGGGCGGCTAATGAGATTGCCGATAAAAACAATGTTAATATCAGTTCTATA
AGAATACAACTACTAGAAAGTATACTTGACAAAACTTACAAAGAAAACAATGTCTCACCC
GGGTTGGATCCGAAAGACTTGATTACCGCAAAATATATTCTAAAGGCCACGTGTCCTAAA
ATGGGGGCGTTTTATCTGTCTAGAATAGCATTTGATGATGAAAGTGATTATAACAAATGT
AAGAAATTGAGGGCTTTACAGTGTTTGATGAGCGCAGTGGAACCGGAGACAGCGGTTAAA
GTAGCACGTCGAGAACGTCATGTACTTTGGAAATCTTTAATAGAACTGTTTTATATTGTT
CATCTTGAACGAATCGATGTGCCGTGGGTCATTGCTACATTTTTACAGGATAAAACATTA
GCGCTAAATCAACTTTTGCAAGTTTCTGGTAATAATATTGAGAGCTTGAAGATTGCAGCG
GAACTAGCTAACAAGTTTGGTGACAGCCAAATAATTCGAGAACTTATTCCTGTTTTGATG
AGGGCTTCTCTGTTCGAAGAAATGATACCATTGCTATTAAAAGTTCAAAATCCACCAGAC
AATATGATCTATTCTGCTTGGAGAGCTATTATGTTGTCACCGTTCCAACGTGCCGATTAC
CCGATCACTGATCGTCAAAAAGCTAAATGTCTAAACGCTTTGAATTTATTACCAGTATGT
CCTGTCATCAAAGATGACGACCTAATAGAAATTTGGAAAAATTGTATAAGATGTAAATGT
TTGGGCTTAGGTTGCTTAGTACTACCATATATGACGGCTCAAGCTAGGCAGTCGTTGACT
GAACTAAAGAAAATTGATAAAAGAACTCTAGTAATAAATTTAAAGAATTTACACAATGAA
ACCTATCTTGTGTCTGGAGCCATGTTCGTTTTAGAAAATTTAACACCAAAACTATCGCGT
TAA
Protein sequence:
MMVMNKSFELIFQFDKNNSNYHPMSANKGIFYYLKWINQEVEIYSASLECHEEQQEEEKI
GNKLKTSNDLLKLQLTNFVDEIIINTTKPAEVLPQLHQMFHNLDDNRFLVSVAKKLCNHN
LLYKPILYPLQKRIYLTEDKSLIDFICDVVIKSDLLEYICFRGGSSYDNVNIFEMNFIQL
CITFISKSDLDLASICWLKYSEMRLTLTADDVVEILNSIPYNIKIGALVIWFRNFVPPVL
EQNVFYVDLFVKWTTDRIFLLEQSSYWPKIGLKFLASIIEVLETSIRTVYIRSISIDDLD
KLQDHIIYISELKEKYKINMLLSEFSSQSPSEIALIMLRRCYTEDLEAFVSESLPKYVSR
HLLEMDETLRSFIDSEAASSGGSIDGPRLKILLSAFKAPCNKLDCLLNVLKILDVPWDTT
VLTIATEAASLVNKDFTITDSDRVIAQEIYKELNYAKIKVILKKYNFPLTCTDYRLVLHK
VISSPTVDLEDLDIFTNILTTYTHYACIMYIDRCLQDCETKKALNYFKNINNRNKRMIVK
AILSKFEQIISSGKVNQLLEKNYIDFLKGTQLLNIIQINSIENLYHLKNSYNIKLNLNEI
NSNSFKESTLQSLKDNEEILSSSLGRGRCISQLISKDLSRKSQLICLLRGISSSRTIRMH
VESLMLSDKNETSDLIKYKDGQNSNILLESHNILSEVSINCNEEDIHEVLKSLSTLNALI
NASTILKNLSVAWKFQYIFLPMSTIHALNDLINIYSYSSQMISVEEFLHIASKGEFIIFR
IIANMIQKSLGNKTSLCDKIVKARDKVTKRMLAKIVSLQDLDQVLITSFLLTLRTTACED
KMWILELLKGQSDSLSPSAMHYLSSPSIRRIFAIDDILPGNNMSYPPQYILKSKFNINLS
EVALPENEETWDVQVLLFYILRRYPNINFSRLIELCQTLNINPNEGVSLLLISVLSTWDL
KYKIYENELGYRQILTEHDQTQLMSQCFVIWHSIKDKDFIRKICTDLWKTGEALVHGCHV
SINPYFYEVYICIYHLVFSSPTDTKYLKEYYILNFLKGYQRKSIPKQYEFELFSIKGIFP
EIGYYRLPLHLFMRDDMWSNLKSEITLETYESWLPIVSLLSLDGDLQTARDMICSNAVKQ
TMTNRKRADSNEADLKDEPWRLTSQEEPLLRTAHRCVRHIANMEWAGACLFYALQGCARG
ADQVAAAQLCYQFSQRWATLQPGNRAVRQMEKLHSSLSTRHVLYKIEWACEELIRLSTEP
VQLINALYLHPKFVEKITRHDINRAANEIADKNNVNISSIRIQLLESILDKTYKENNVSP
GLDPKDLITAKYILKATCPKMGAFYLSRIAFDDESDYNKCKKLRALQCLMSAVEPETAVK
VARRERHVLWKSLIELFYIVHLERIDVPWVIATFLQDKTLALNQLLQVSGNNIESLKIAA
ELANKFGDSQIIRELIPVLMRASLFEEMIPLLLKVQNPPDNMIYSAWRAIMLSPFQRADY
PITDRQKAKCLNALNLLPVCPVIKDDDLIEIWKNCIRCKCLGLGCLVLPYMTAQARQSLT
ELKKIDKRTLVINLKNLHNETYLVSGAMFVLENLTPKLSR