New model in OGS2.0 | DPOGS202284  |
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Genomic Position | scaffold664:- 127064-135534 |
See gene structure | |
CDS Length | 1608 |
Paired RNAseq reads   | 1681 |
Single RNAseq reads   | 4592 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004940 (4e-30) |
Best Drosophila hit   | septin interacting protein 3 (2e-113) |
Best Human hit | E3 ubiquitin-protein ligase synoviolin isoform b (3e-113) |
Best NR hit (blastp)   | synoviolin [Aedes aegypti] (6e-167) |
Best NR hit (blastx)   | PREDICTED: similar to synoviolin [Tribolium castaneum] (1e-136) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0016881 acid-amino acid ligase activity GO:0005783 endoplasmic reticulum GO:0030433 ER-associated protein catabolic process GO:0005515 protein binding |
InterPro families    | IPR018957 Zinc finger, C3HC4 RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type |
Orthology group | MCL14398 |
Nucleotide sequence:
ATGAAGGCTTTAGTGGCGACTGTGATCAGTCTAGCCCTCACTACTGTGGTAATAGGCAAT
GCCTATTACCAGAAGAAACAGTTTTATCCATCTGTAGTTTATCTCACTAATTCCAATCCT
AGTATGGCTGTCATGTATTTACAAGCTTTCATACTGGTGTTATTGGTTGGTAAAATTTTG
CGCAAAATCTTCTTTGGTCAACTGCGGCCAGCCGAATTCGAGCACTTAATAGAAAGATCT
TGGTATGCCATAACGGAGACTTGTCTTGCATTCACGGTGTTCAGAGATGACTTCAATCCT
AAGTTCATAGCACTTTTCACTCTCCTGCTGTTTTTGAAGGCATTCCATTGGCTCGCTGAA
GATCGAGTCGATTATATGGAAAGGAGCCCGGTGATTGGTTGGCTTTTCCATGTAAGGATT
CTAAGTTTATTAACACTTTTGGCTCATGCGGACCTGTATTTCATCCATCACGCGTACTCC
TTCACCACATCCAAGGGTCCGTCGGTGCAGGTTGTGTTTGGATTTGAGTACAGCATTCTC
ATATTTATGATTGCGAATATCTTAATCAAGTACATGCTGCACGCGATCGACTCCCGCTGG
GAGGCTCCCTGGGAGAGTAAGGCGGCGGTTCTTCTCTACACTGAGTTGGCTATCAACTTC
CTTAAGGTCCTTTTATACATCGGCTTCGTAGCCGTCATGGTGCGAATCTACACTCTGCCG
CTGTTCGCCTTCAGACCCATGTACGAAACATTAAGGAGTTTTAATAAAGCGTACAACGAT
GTGGTATTGTCACGTCGAGCGATCAGGAACATGAACACCCTGTATCCGGACGCTACCCCC
GAGGAGCTAGCGGCGGCCGACAATGAATGTATCATATGCAGGGAGGAGATGCATAGCGGA
GCTAAGAAGCTTCCGTGCAACCACATCTTCCACGCCGCCTGCCTCCGTCTCTGGTTCCAA
CGACAGCAGACTTGTCCGACTTGTCGTCTTAACGTTCTTAGAGCGCCAGCGCCTGAGCCG
CCGAACGCTAACCCCAACGCCAACGTGCCGAACGTCAACCCGCCAAACGTCAACGCGCCT
AACGTGCAGGCTCCGACCCCACCAGCCGTTCCACCACCACCCTTCCCCAATATGCCTCCA
CCACCACCGATGATGGGTTGGGCGCTCCCTCCTCCTCCCCCCCGGCCGGCCTCGCTCGCT
AGTCTCACCACCGAGGAACTGAGACGTATGGAGGGAAACGAGAGAAGGAACATAGAGGCG
CGTCTACAGTTACTCATGGAGATCCAGTCGATGCTGGACGCATCCGTGCTGTTGATGCAG
CAGTACTCGAACGTTGTCTCCAACCAGCCCGCCAACCTGTCCAACGTGGCCACACAGACG
GACATACGAAGGACGGAACCTTCCCCCGAGCCGTCTCCGGTGCGTGTGAGAGCGGATCCG
GAACCCGTTGCTTCTACTTCCAAGATGTCGACCTACATCGCTACACCTGGACCATCCAGC
AGACACGACTTTGAAGATATGGAGACGAGTGTAAATAGGGAAATATCTGATGCCGACGCT
GAAGAGCTCAGGCGACGTAGATTACAGAAGTTTAGTGCAGAAAAGTGA
Protein sequence:
MKALVATVISLALTTVVIGNAYYQKKQFYPSVVYLTNSNPSMAVMYLQAFILVLLVGKIL
RKIFFGQLRPAEFEHLIERSWYAITETCLAFTVFRDDFNPKFIALFTLLLFLKAFHWLAE
DRVDYMERSPVIGWLFHVRILSLLTLLAHADLYFIHHAYSFTTSKGPSVQVVFGFEYSIL
IFMIANILIKYMLHAIDSRWEAPWESKAAVLLYTELAINFLKVLLYIGFVAVMVRIYTLP
LFAFRPMYETLRSFNKAYNDVVLSRRAIRNMNTLYPDATPEELAAADNECIICREEMHSG
AKKLPCNHIFHAACLRLWFQRQQTCPTCRLNVLRAPAPEPPNANPNANVPNVNPPNVNAP
NVQAPTPPAVPPPPFPNMPPPPPMMGWALPPPPPRPASLASLTTEELRRMEGNERRNIEA
RLQLLMEIQSMLDASVLLMQQYSNVVSNQPANLSNVATQTDIRRTEPSPEPSPVRVRADP
EPVASTSKMSTYIATPGPSSRHDFEDMETSVNREISDADAEELRRRRLQKFSAEK