| New model in OGS2.0 | DPOGS202305 |
|---|---|
| Genomic Position | scaffold664:+ 157060-158428 |
| See gene structure | |
| CDS Length | 762 |
| Paired RNAseq reads | 205 |
| Single RNAseq reads | 817 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004977 (7e-90) |
| Best Drosophila hit | mitochondrial ribosomal protein L9 (4e-61) |
| Best Human hit | 39S ribosomal protein L9, mitochondrial precursor (7e-20) |
| Best NR hit (blastp) | PREDICTED: similar to GA16276-PA [Tribolium castaneum] (7e-67) |
| Best NR hit (blastx) | PREDICTED: similar to GA16276-PA [Tribolium castaneum] (4e-66) |
| GeneOntology terms | GO:0006412 translation GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome |
| InterPro families | IPR009027 Ribosomal protein L9/RNase H1, N-terminal IPR000244 Ribosomal protein L9 IPR020070 Ribosomal protein L9, N-terminal |
| Orthology group | MCL14081 |
Nucleotide sequence:
ATGTTCGGTATCCGTACAGCATTATCTAAAACTATTGCTAATGGTCCAAATTTATTACAT
CAACAAACAAGGAATACATTTATTTTGAAGAGAAGATGGCCTCCACCACTGCATAAGCAA
GGAGGGAAGCCCGCCAAATTAAAAGCAAGACATTTTATTTATGATTTAGTTGAGGACACT
TGTGTATCTAAAAAACAGGATGTCCAAATCATCTTAAACCAATTTGTTGAAGGTGTTGGT
AATACCGGTGATCTACTCACTCTTCGTCCCACTATTGCCTACAGAGACTTTCTTATGCCT
GGCTTAGCTGTATATGCCAGTCCAGAAAACATTTCAAAGTTCAAAGTTGAAGAAAATAAA
CCCAAAGTGGAAGCAGAATTCAGTTCACCGTATGCTCAGAGGACTGTGGGATGTTTGTCA
AGATTAGTGTTGCAAATCACAATGAGTAAAACAAATCCATGGACTCTAGAGCCCTGGCAT
GTTAAGACATCATTTAGAAAGGCAGGATTTGTTGTTCCGGAACATGCAATAACAATGCCG
CCAGTAAAAATATCTGGTCCCGATCTAGAATTGCAGGAAAAAGAATTTTATGTTACCGTT
AAAGTCAATAATAAGGAACAGGTTAACGTAAGATGCAGAATACATCATTGGGCTACAGGA
CTAGAAAGACTAGCATGGCAAAAAGAACATTGGAAGAAACCCATGCAAGCTCTTATCCCA
GAACAGGCGGCCATTTTGGAAAGTATGCCCTTACCACAATAG
Protein sequence:
MFGIRTALSKTIANGPNLLHQQTRNTFILKRRWPPPLHKQGGKPAKLKARHFIYDLVEDT
CVSKKQDVQIILNQFVEGVGNTGDLLTLRPTIAYRDFLMPGLAVYASPENISKFKVEENK
PKVEAEFSSPYAQRTVGCLSRLVLQITMSKTNPWTLEPWHVKTSFRKAGFVVPEHAITMP
PVKISGPDLELQEKEFYVTVKVNNKEQVNVRCRIHHWATGLERLAWQKEHWKKPMQALIP
EQAAILESMPLPQ