New model in OGS2.0 | DPOGS202308  |
---|---|
Genomic Position | scaffold664:+ 176421-184967 |
See gene structure | |
CDS Length | 1080 |
Paired RNAseq reads   | 603 |
Single RNAseq reads   | 1828 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004980 (1e-138) |
Best Drosophila hit   | widerborst, isoform E (5e-124) |
Best Human hit | serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform 1 (2e-107) |
Best NR hit (blastp)   | PREDICTED: similar to widerborst CG5643-PC [Tribolium castaneum] (2e-165) |
Best NR hit (blastx)   | PREDICTED: similar to widerborst CG5643-PC [Tribolium castaneum] (2e-134) |
GeneOntology terms    | GO:0000159 protein phosphatase type 2A complex GO:0004722 protein serine/threonine phosphatase activity GO:0008601 protein phosphatase type 2A regulator activity GO:0007165 signal transduction GO:0007059 chromosome segregation GO:0051225 spindle assembly |
InterPro families    | IPR016024 Armadillo-type fold IPR002554 Protein phosphatase 2A, regulatory B subunit, B56 |
Orthology group | ND |
Nucleotide sequence:
ATGTCTTCGGGAACGTTTGTGGATAGGATTGATCCTTTCGCTAAGCGGTCGATGAAGAAA
AAGACGAAGAAGTCGCAGGGGTCCTCGCGTTACCGTAATACGCAGGACGTAGAGTTACAG
ACATTGCCTTTTTTTAAAGATGTACCCGTCAGTGAACAAGAGGAGCTTTTTATTCGTAAA
CTGCGCCAGTGCTGTGTCGCTTTTGATTTTATGGACCCAGTGGCCGATTTGAAGGGGAAA
GAAATTAAGCGTGCAACACTCAATGAGCTTGTAGAGTACATCCATAGTGGCCGTGGTGTG
CTCACTGAACCTGTCTATCCGGAGATGATAAAAATGATATCAGCGAACCTGTTTCGTACA
TTGCCTCCAAGTGACAACCCTGACTATGACCCAGAGGAGGACGACCCCACCCTGGAGGCG
TCCTGGCCACACCTCCAGCTGGTATATGAGTTCTTCCTCCGTGCGCTGGAGTCAGCTGAC
TTCCAGCCGACCATCGGCAAGAAGGTCATCGATCAGAAATTTGTTTTGCAGTTGTTAGAG
CTGTTCGACTCCGAGGATCCACGCGAGCGTGACTTCCTGAAGACCGTTCTCCATCGCATC
TACGGCAAGTTTCTGGGGCTGCGTGCCTTTATCAGGAAGCAGATCAATAACATCTTCCTT
AGATTCGTCTACGAGACGGAACACTTCAACGGCGTCGGTGAACTCCTAGAAATATTGGGA
AGCATAATAAACGGTTTCGCGCTGCCGTTGAAGAGCGAACACAAGCAGTTCCTCGTGAAG
GTGCTGTTGCCGTTGCACAAGGTGAAGTGCCTCACCCTGTACCACGCCCAGCTCGCGTAC
TGCGTGGTGCAGTTCCTGGAGAAGGACGCCACTCTCACGGAGCCGGTTGTACGAGGTCTG
CTCAAGTTCTGGCCGAAGACTTGCTCGCAGAAAGAGGTGTGTACATATATCTATATATTA
GTGTGTGTGTGTGCTTATGTGTGTGTGTTTATAGCATACATCAAGTTCGTTGGTTTGCTC
TACAAACTTGTAAGCATTAAATCCGATGGGTATCTTTACACTAACATGTACTTTAGTTAA
Protein sequence:
MSSGTFVDRIDPFAKRSMKKKTKKSQGSSRYRNTQDVELQTLPFFKDVPVSEQEELFIRK
LRQCCVAFDFMDPVADLKGKEIKRATLNELVEYIHSGRGVLTEPVYPEMIKMISANLFRT
LPPSDNPDYDPEEDDPTLEASWPHLQLVYEFFLRALESADFQPTIGKKVIDQKFVLQLLE
LFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVGELLEILG
SIINGFALPLKSEHKQFLVKVLLPLHKVKCLTLYHAQLAYCVVQFLEKDATLTEPVVRGL
LKFWPKTCSQKEVCTYIYILVCVCAYVCVFIAYIKFVGLLYKLVSIKSDGYLYTNMYFS