| New model in OGS2.0 | DPOGS211475 |
|---|---|
| Genomic Position | scaffold33:- 211372-214423 |
| See gene structure | |
| CDS Length | 993 |
| Paired RNAseq reads | 9077 |
| Single RNAseq reads | 20319 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007988 (8e-118) |
| Best Drosophila hit | nucleosome remodeling factor - 38kD, isoform A (7e-89) |
| Best Human hit | inorganic pyrophosphatase (5e-78) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP003398-PA [Tribolium castaneum] (2e-107) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP003398-PA [Tribolium castaneum] (1e-101) |
| GeneOntology terms | GO:0006338 chromatin remodeling GO:0004427 inorganic diphosphatase activity GO:0005737 cytoplasm GO:0016589 NURF complex GO:0005634 nucleus GO:0042766 nucleosome mobilization GO:0006350 transcription GO:0006796 phosphate metabolic process GO:0000287 magnesium ion binding GO:0035076 ecdysone receptor-mediated signaling pathway |
| InterPro families | IPR008162 Inorganic pyrophosphatase |
| Orthology group | MCL11958 |
Nucleotide sequence:
ATGTCAGTAACACGCGTTTTAGCGGCGAGTCCCCGGTGTTTGTCATTTGTTAAAACGCTT
TGTGCGTCTGTCGGCGTAGTTCACGTTAGGAAAGTGACGACGGTTACTGAAACGATCCGC
TCCAAGATGTTCATCGCTGAAGAACGTGGCTCCCCTTTCGCGCCCGACTACAGGGTCTAT
TTTAAGGACGAGAGCGGTCCCGTCTCTCCGCTCCACGACATCCCGCTGTGGGCGGACCGC
GGCCGGCGCGAGGCGCACATGGTGGTGGAGGTGCCGCGCTGGAGCAACGCCAAGATGGAG
ATCAGTCTCGGGGAACCTCTCAACCCAATCAAGCAGGACGTGAAGAAAGGCGCGCTCAGG
TTCGTGGCCAACGTGTTCCCCCACCACGGGTACATCTGGAACTACGGAGCGCTGCCTCAG
ACCTGGGAGAACCCGCAGCACGTGGACCCCGCCACGCAAGCCCGCGGCGACAACGACCCC
ATAGACGTCATAGAGATCGGCGAGAGGGTCGCGGCCAGAGGTGACGTCATCACCGTCAAG
ATACTCGGAACACTCGCTCTCATCGACGAAGGAGAGACAGACTGGAAGTTGATAGCCATC
GACGTGAAGGACCCCGCGGCCGCCAGGATGAACGACGTGGCCGACGTGGAGACCGTGTTC
CCGGGGCTACTGAGGGCCACCGTGGAGTGGTTCAGATTGTACAAGGTGCCGGACGGGAAG
CCCGTCAACCAGTTCGCCTTCGACGGAGAGGCCAAAGACGCCGCCTTCGCGCACCGCGTC
GTGGACGAGGTGCACGAGTTTTGGAAGGCGCTGGTGGCGGGGGAGGCCGCGGACGCCAGC
GACATCTGTAAGATGAACGTGTCGGTCGCGAACAGCGCGGCGCGCGTGGAGCGCGGGGAG
GCGGCGCGAGTGTTGGCCGGAGCTCCGCCGGCAGCTCTACCTCAGGACATACCAGCCAGC
GTTGACAAGTGGCACTACTTGTCGAGTCTCTAA
Protein sequence:
MSVTRVLAASPRCLSFVKTLCASVGVVHVRKVTTVTETIRSKMFIAEERGSPFAPDYRVY
FKDESGPVSPLHDIPLWADRGRREAHMVVEVPRWSNAKMEISLGEPLNPIKQDVKKGALR
FVANVFPHHGYIWNYGALPQTWENPQHVDPATQARGDNDPIDVIEIGERVAARGDVITVK
ILGTLALIDEGETDWKLIAIDVKDPAAARMNDVADVETVFPGLLRATVEWFRLYKVPDGK
PVNQFAFDGEAKDAAFAHRVVDEVHEFWKALVAGEAADASDICKMNVSVANSAARVERGE
AARVLAGAPPAALPQDIPASVDKWHYLSSL