| New model in OGS2.0 | DPOGS211476 |
|---|---|
| Genomic Position | scaffold33:- 201460-205068 |
| See gene structure | |
| CDS Length | 1287 |
| Paired RNAseq reads | 710 |
| Single RNAseq reads | 1971 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007989 (4e-64) |
| Best Drosophila hit | CG13830, isoform C (2e-38) |
| Best Human hit | testican-2 isoform 2 (2e-26) |
| Best NR hit (blastp) | PREDICTED: similar to Nucleosome remodeling factor - 38kD CG4634-PA [Apis mellifera] (1e-65) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004567 [Tribolium castaneum] (2e-43) |
| GeneOntology terms | GO:0007165 signal transduction GO:0005578 proteinaceous extracellular matrix GO:0005509 calcium ion binding |
| InterPro families | IPR000716 Thyroglobulin type-1 IPR019577 SPARC/Testican, calcium-binding domain IPR011497 Protease inhibitor, Kazal-type IPR011992 EF-hand-like domain |
| Orthology group | MCL12862 |
Nucleotide sequence:
ATGCGGCCTAGGGGGCTGGCAGCTCTGCTGGCTGCCCTGCTGGCTGCGCTGCCTGCCAAC
GCCGCTCAGAGGAGGATCGACCAGGACTTCGAGTTCGACGATGCCCCGGAGACGGCAGTA
ACGCACGCGCGTCGTCCTCGGAGATATGTTTACGATCCTGAGAATCCGATGTGTCGCGCC
CTCGTGTGCAAGAAGCGCGAGGTGTGTCTGCTGCGCGACTCCTACACCGCGCTTTGCGCC
TCCAAGAAAGACGTTCTCAGGAGAGGAGATCAAATAGTTTCGGACGTGTCGAGCGATGAC
GAGGACGTATTCTACGAGTCTTCCTCGGAGCACCGAGCGGGGTCAAGTCCCGGGTCCGGT
CCGGGGTCAGGTCCGGGGTCCGGTCCGGGGCCCGGCCGTTGTGTGGGGTGCGGCGGGGCG
GCGCGCGCGGCCTTCCTCTGCGGCTCCGACAACCGCACCTACTCGTCCTTGTGCCGGCTG
GACCTCCATAACTGCGTGCACCGCTCGTCGCCGCCCGTGCGCCTCGCCTGCCGCGGCTTC
TGTCCCTGCAAGCCCCGAGCGCCGCGCCCTCGACCGCACCGCACCCGCGGCTTCTACGAA
GATGAACGAAGACGTCGCCGACTCGACTCTCACAACGAGGTGTACGAGCGCCCTTTCCGC
CGTCCGTCTCAAGACGTTGATGGTTGCGCTCTCGATAAGATGGCTAACCGTCTCCTTGAC
TGGTTCTCCGTCTTGATGGACGAGGCGGGAGGCGTTCCTCCGCCGCAAGAAGGTTTCCCC
TCAGGCTGTAAGCCCGAGGTCCGTTGGATGTTCTCCCACCTGGACGCCGGCGGCGACGGG
CTGCTGTCTCCGAGCGACTTGTACGCGCTCCGTCACGACGAGCGCGAGCGTTGTCTCCGG
CCGTTCCTGTCGTCGTGTGGTCCGGGGGCGCTGTCTCGTTGGTCCTGGTGCGGATGCCTG
TCCCGGGCCTCTCGGCCGTGCGCGGCGCTGTCTCGGGCTCACCCCGCTCCTCCTCCGGGC
TCGTACGTGCCGTCCTGCGATTCTCGCGGTTGGTACAGACCTCGCCAGTGTCACGCCGCA
CTCGGCGTGTGTTGGTGTGTGGACGCGCATGGCGTGGAGCTCGCCGGCTCGAGGACTAAG
GGAAAGCCTCGGTGCCCCGGTGAAGACGAGGCTGAGGAGACGGAGTCTCGGGGGGGTGAG
GTGAGGGAGGGTGACGTGAGGGGAGCACCAGATGACGATGAGGATGCCGGAGGCAGCGGC
GACAGGAACAACGAACTGAGGTTCTAA
Protein sequence:
MRPRGLAALLAALLAALPANAAQRRIDQDFEFDDAPETAVTHARRPRRYVYDPENPMCRA
LVCKKREVCLLRDSYTALCASKKDVLRRGDQIVSDVSSDDEDVFYESSSEHRAGSSPGSG
PGSGPGSGPGPGRCVGCGGAARAAFLCGSDNRTYSSLCRLDLHNCVHRSSPPVRLACRGF
CPCKPRAPRPRPHRTRGFYEDERRRRRLDSHNEVYERPFRRPSQDVDGCALDKMANRLLD
WFSVLMDEAGGVPPPQEGFPSGCKPEVRWMFSHLDAGGDGLLSPSDLYALRHDERERCLR
PFLSSCGPGALSRWSWCGCLSRASRPCAALSRAHPAPPPGSYVPSCDSRGWYRPRQCHAA
LGVCWCVDAHGVELAGSRTKGKPRCPGEDEAEETESRGGEVREGDVRGAPDDDEDAGGSG
DRNNELRF