| New model in OGS2.0 | DPOGS207946 |
|---|---|
| Genomic Position | scaffold340:- 190975-195855 |
| See gene structure | |
| CDS Length | 1608 |
| Paired RNAseq reads | 40 |
| Single RNAseq reads | 137 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000387 (1e-157) |
| Best Drosophila hit | CG7509 (9e-67) |
| Best Human hit | carboxypeptidase N subunit 2 (1e-30) |
| Best NR hit (blastp) | PREDICTED: similar to GA20402-PA [Tribolium castaneum] (1e-95) |
| Best NR hit (blastx) | PREDICTED: similar to GA20402-PA [Tribolium castaneum] (3e-96) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL15283 |
Nucleotide sequence:
ATGGACTTCCATTTTATTATATATATATTTTTCATTTTAGGAACAATAACAATTCAAATA
GAAGCATCTGATGTCACTTCGAAAGCAGATTGTAATCTTTCACCATGCGATGTCTTGGAT
GTATTTAGTAACAATCCCAAGCCGGGACAAACAATTAGTACGGGCTGCACGAGTGACTTG
CATTGGCGGAAACTCGACCGACGACTACAGTCTATTGAACAGCCCGTATGGACAATAAGT
TTTAGTCAATCACGCTGGCGACAATGTTCTAAGAGTTCCTGTAGGTGCGATTCAGTTCAC
CGGTCCCTAAATTGTTGGAGGGCCGGCCTCACATCCCTCTCACCAGAACTCATCGTGCCA
GCGGATCTATACACTATAGACCTAGGAACCAACAAACTCCGCACGTTACATAAGACGACA
TTCAAAGGAATGCGTTCTTTAACAGAGTTGGATATGTTCGATAATCACGTTGAATTCTTG
CCTCCTGGAATTTTTGATTCACTTGTTAATTTGCGAATACTCCGCCTACAAAGAAATTAC
TTAGAAGAAATTGACGGAGAGGCCTTTCGATACACGAAAAGACTTTTTCATGTGGATTTA
TCAAATAATTTCCTTTACACCCTTCCAGAAAGACTATTTGTTAACAACTCTTATTTGGAA
ACTATTGATTTATCAAATAATCAAATTATTTATATGCCTTCTGATACATTTATCGGCCTG
AAATCGCTACTGATTCTTGACTTATCAAGAAATAAAATTCTACAAATAGAAAATGCAACA
TTTATATTGAATCGTCTTCAAATACTGAAACTTTCAGATAATAAAATAACTAATATTACC
GAGAATGCTTTTGAAAGTCTTTCTTCTTTGGAGACATTATTGCTTGATAAAAATGATTTA
AGAAACATACCTACCGCTCTGTTTCGAAGACTTTATTGTTTAATTTTTTTAGATTTGTCA
AATAACGACATTGTAAGCTTGACTGGACTCGAGTTTCAAAGTTTAAGTCAGCTCCGAAAT
TTAGATTTGAAAGGAAATTTAATATCAGAAATTCCAGACGACACATTTGCCAACTGTTCA
AACTTAGAAAAAATTGACTTGTCCAAAAATAAATTGCGATACCTAAACGCTTCAGCATTT
CGTGGTTTGGAAAATCTAACAACTCTCATACTGTCCGATAACCAGATATACGAAGTACAT
TTTAAGACTTTTTTTAATTTAAAGAATCTTACAACATTATACTTGGATAGTAACATGTTT
CCATCTATGCCGTCTCGTACATTGGATTACATGCCTAAACTTGCTAATGTGAAACTTTCA
AACAACCCCTGGCACTGTGACTGTCACGCCCTCTACATATCCGCATGGGTTCGTTTAAAC
GAAATGAAGATATGGGATTATTCGCCGACATGTATCTCACCTTGGTATTTAGAAGGACAT
TTCCTGAAGAAATTGAAGTTCCCTGAACTGTGCACTGGACAATGGGCCAGTATGGTGAAT
CTGTCGCCTCGCTTACCGATGCAGCAGCTACTATCGCTCAACGTGACAGTTAATCAGAAG
CCTCAAGGCAGCATCGAGCAATCCAATGACGATATTGAAGAATGGTGA
Protein sequence:
MDFHFIIYIFFILGTITIQIEASDVTSKADCNLSPCDVLDVFSNNPKPGQTISTGCTSDL
HWRKLDRRLQSIEQPVWTISFSQSRWRQCSKSSCRCDSVHRSLNCWRAGLTSLSPELIVP
ADLYTIDLGTNKLRTLHKTTFKGMRSLTELDMFDNHVEFLPPGIFDSLVNLRILRLQRNY
LEEIDGEAFRYTKRLFHVDLSNNFLYTLPERLFVNNSYLETIDLSNNQIIYMPSDTFIGL
KSLLILDLSRNKILQIENATFILNRLQILKLSDNKITNITENAFESLSSLETLLLDKNDL
RNIPTALFRRLYCLIFLDLSNNDIVSLTGLEFQSLSQLRNLDLKGNLISEIPDDTFANCS
NLEKIDLSKNKLRYLNASAFRGLENLTTLILSDNQIYEVHFKTFFNLKNLTTLYLDSNMF
PSMPSRTLDYMPKLANVKLSNNPWHCDCHALYISAWVRLNEMKIWDYSPTCISPWYLEGH
FLKKLKFPELCTGQWASMVNLSPRLPMQQLLSLNVTVNQKPQGSIEQSNDDIEEW