| New model in OGS2.0 | DPOGS207958 |
|---|---|
| Genomic Position | scaffold340:+ 27505-75096 |
| See gene structure | |
| CDS Length | 2079 |
| Paired RNAseq reads | 620 |
| Single RNAseq reads | 1438 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000308 (3e-118) |
| Best Drosophila hit | synapsin, isoform D (3e-137) |
| Best Human hit | synapsin-1 isoform Ia (2e-101) |
| Best NR hit (blastp) | PREDICTED: similar to Synapsin CG3985-PE [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC002264 [Tribolium castaneum] (2e-160) |
| GeneOntology terms | GO:0043195 terminal button GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0016079 synaptic vesicle exocytosis GO:0045202 synapse GO:0005524 ATP binding GO:0003824 catalytic activity |
| InterPro families | IPR016185 PreATP-grasp-like fold IPR001359 Synapsin IPR020898 Synapsin, ATP-binding domain IPR020897 Synapsin, pre-ATP-grasp domain IPR013817 Pre-ATP-grasp fold IPR013816 ATP-grasp fold, subdomain 2 IPR013815 ATP-grasp fold, subdomain 1 IPR011761 ATP-grasp fold |
| Orthology group | MCL10372 |
Nucleotide sequence:
ATGGCGTCTACATCGCACGTTGCCGCCCAAAATCAATACGCGCGCGCCGTCCCGCTGATT
TTCACCACAGTCTCACACAAGGCACCCCCATTTACAATAATTTCCCTACCCGTTAAAACG
CGTCCCGTGCTCCACAATCATCACTGCCGGATTTATCCTTGCTATCTAATACGATCTGCA
TTTCCTTGGTCGCCGTCGTGTCGTGCTATCAATTCCCGGGCGGTCAAAATAGATCGTTCG
GGGTGTCCTGGAATCTGTGGCCCGCAGGCCGCGACCACATCAACCCTGTCTTTCTCAAGC
TTCCGAAATTCATTCACCTCCAATGTCAATTACCTGAAAAGAAGCTCAGCGGAGGCGTTA
CGCAGATTCAGCTCGGGGGACCTGCAGTCGGAGTGCGATGAGGGAGAAGTGGATCCTTAC
ACAGGCCGCCCGGCCACAACGAGCCAGCCCAAGCCGCAGGCTCAGAGGCCGGCCTCCCAG
GTTACGGGAGGCAGTATGGGTAGCGGTGCGCCGCCAGCTCCTAGCTCTGGCACCGCTTCA
GCCGGTGGTTCAGATTTATCTTTGAACCTTCGCGGTGGCTCACGAGGAACCTCAGCACCC
TCCTCTCCAGCGAAGTCTCGTGAATCGCTGCTGCAGCGTGTACAATCTTTAACCGGAGCT
GCCCGAGATCAAGGAGCCAATTTATTAGGGAGCGTGACATCAGTAGCGTCAGTTGGCCGT
GGTTACAACAGGGACCGATGTGTGACACTGCTGGTTGTGGATGACCAGAATACTGACTGG
TCCAAATATTTCCGTGGACGACGACTACCAGGGGAATGGGACATCCGCGTTGAACAGGCT
GAATTCAGGGAATTGTCGGTGACAGCAAGTTCTGATGGGGCGAATGTTTCTATGGCCGTA
TATCGCAGCGGAACTAAAGTAACCCGTTGTTTCAAACCCGAGTTCGTCCTGGTTCGTCAG
AATGTTCGAGACGCCGGTGCTGATCACAGAGCTCTGCTGCTCGGACTTAAATTCGGGGGA
GTGCCTTCTGTTAACAGCCTTAACTCTATTTATCACTTCCAGGATCGGCCTTGGGTGTTT
GGTCACCTTCTTCAACTGCAGCGTCGCCTCGGCAGAGAGAACTTCCCTCTCATCGAACAA
ACTTACTACCACAATCACACCGATATGGTATCAGCACCGAAGTTCCCGGTGGTTATAAAG
ATTGGGCATGCACACAGCGGCGTTGCCAAGGTGAAAGTTGAGACTTTGGCCGACTTCCAG
GATATAGCCGGAGTGGTAGCCATGTTGGGAACGTATTGCACTGTTGAGCCATACATCGAC
GCCAAGTATGACATTCACATTCAGAAAATTGGAACAAACTATAAAGCCTTCATGCGCAAG
TCTATATCTGGCAACTGGAAGACCAATCAGGGCTCGGCTATGCTGGAAGCTATTGGCATG
AATGATAGATACAAGATGTGGATAGATGAGGTGAGCGAGATCTTTGGCGGCCTAGAAGTT
TGTGCTCTTGAACTAGTAGTCGGCAAGGATGGACGTGAGCACATCATTGAACTGAACGAC
TCCGCGACATCATTCATGGGCGATTCTCAGGAAGAAGATCGCCGACATCTTGCTGAACTT
GTCTTCCAACGGATGCAGGCCGTATGCCGTCCTGGTATAACCAAAACGGCATCTCGCAGT
TCCGTGTCCGGCAGCGGCGCGGCGTCTCCCGAGGAGCGTTCAGTTAGCGGCCCGCCGTCA
GTGCCTCCTCCCGCTCCACTCGCCACCGCGGCCAGCATCGACCGCCCACTGCCGCCCATA
CCCGCGGAGCCAACTCAACCACCACCACCCCCACTCACACGGAGAGATTCACAAGTTTCC
CAATCATCAACGGTGTCGTCTGCGTCGGCGGCTCCTAGTACGACCAGCTCAGCGGCGGGA
ACTGCGACGGGAACTGCAGCTCCCGCGGGTGCAGGTGGTACGCCCTCCCGCGGAGGCTTC
GCCCGTCAGGGCTCTCTTAGCGCCGCACTAACAGAAGACGCGGAAGACACCATGAAGAAC
CTTCGTAAGACCTTCGCCGGTATCTTCGGAGACATGTAA
Protein sequence:
MASTSHVAAQNQYARAVPLIFTTVSHKAPPFTIISLPVKTRPVLHNHHCRIYPCYLIRSA
FPWSPSCRAINSRAVKIDRSGCPGICGPQAATTSTLSFSSFRNSFTSNVNYLKRSSAEAL
RRFSSGDLQSECDEGEVDPYTGRPATTSQPKPQAQRPASQVTGGSMGSGAPPAPSSGTAS
AGGSDLSLNLRGGSRGTSAPSSPAKSRESLLQRVQSLTGAARDQGANLLGSVTSVASVGR
GYNRDRCVTLLVVDDQNTDWSKYFRGRRLPGEWDIRVEQAEFRELSVTASSDGANVSMAV
YRSGTKVTRCFKPEFVLVRQNVRDAGADHRALLLGLKFGGVPSVNSLNSIYHFQDRPWVF
GHLLQLQRRLGRENFPLIEQTYYHNHTDMVSAPKFPVVIKIGHAHSGVAKVKVETLADFQ
DIAGVVAMLGTYCTVEPYIDAKYDIHIQKIGTNYKAFMRKSISGNWKTNQGSAMLEAIGM
NDRYKMWIDEVSEIFGGLEVCALELVVGKDGREHIIELNDSATSFMGDSQEEDRRHLAEL
VFQRMQAVCRPGITKTASRSSVSGSGAASPEERSVSGPPSVPPPAPLATAASIDRPLPPI
PAEPTQPPPPPLTRRDSQVSQSSTVSSASAAPSTTSSAAGTATGTAAPAGAGGTPSRGGF
ARQGSLSAALTEDAEDTMKNLRKTFAGIFGDM