| New model in OGS2.0 | DPOGS207959 |
|---|---|
| Genomic Position | scaffold340:+ 82311-90102 |
| See gene structure | |
| CDS Length | 4602 |
| Paired RNAseq reads | 252 |
| Single RNAseq reads | 694 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000310 (0.0) |
| Best Drosophila hit | CG3996 (7e-97) |
| Best Human hit | TBC1 domain family member 30 (3e-78) |
| Best NR hit (blastp) | PREDICTED: similar to CG3996-PA isoform 1 [Apis mellifera] (2e-143) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC002265 [Tribolium castaneum] (5e-117) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL12373 |
Nucleotide sequence:
ATGAAAACAATTACTATAACTGAGCCTATTAATTTAAGAGTAGTTAAGTTTGAACTCGAT
TTTTCATCGCTATACGACTATAAACCTAAACATCGCAAGAAAAGCAAAGCAATCAATGTC
CCGCATATAAACTGCGAAAAGAAACAAAACGAGATACCAAATCCACCAGAAATACAATGT
AAACAAAAGAAGCAAAACGTAAAAGAATTGGTTGAAGAACTTTTAAATGATATTTATGCT
GATCATCGAGATTGGACAACCATTAGCGGTCACGGATCGACTGCTGCATCTTTTACTTCC
TCGCAATCAAACTGTGGGGAACAATCAGATTTCATCGAGATCAGCTATTTGGAATCTTTG
GATATCAATGAACTCAAAGACCAAGTTCTGGAATGGAAAAGGTGTCTGCAAGTAGCTGGG
GAACGTTTAGCCAAATGTTTACGGTTACGTGATCGTCTGCACCGTCAACAGAAAAAGCTA
TGTGCAGCATTCACAGTAATTCTACGTCATTTAAGACAGATGAGTGCTATTCTGAATTCT
CTCAGGAACTTGGCAAGTTCTGCGAAGACTGCCTCAGCTGGCGATGCAAACATACGATTC
GGGGTTACGCCAGGCAGCGAAGCCCCCGGCGAGGGTGGTTTTACGGAGTGGCTACACGCT
ATGCGTCTAGTTGCTCGCCTACCTGCTGGAGTACCACAGCACTTCCGCAGAAAGCTATGG
TTGACGCTAGCAGAGCGCCACTTGACCGCGCGCGGGGTAGACTGGCCGGCCGCGGAGCGC
GCGTGTTTTCGAGGCACCGCCCAGCCCGATGATACTGAACTCAGTGCTCAAATCCTTAAG
GATCTGCACAGAACAGGCTGTTCCCTTTTTTGTGGAGTGGAAGGTCGCGAGAATCAAGCA
ATGCTTAGAAGAGTTTTGTTAGCTTACGCCAGGTGGAATAAGGATGTTGGTTATTGTCAA
GGTTTTAATATGTTAGCAGCTATTATTTTGGAAGTTATGGATAAGTCGGAATCAGATTCT
TTAAAGGTAATGATTTATTTAGTAGAGGCAGTTCTACCTGAAGGCTACTTTGCAGATGAT
CTTCGAGGTTTATCAGCTGATATGGCGGCTTTCAGAGATCTTTTGAGATTAAGACTACCT
AGATTGGCACAACATATGGACCACTTGCAACGAATATCTGACGGTGGTGGTGTAGAGCCT
CCTTTGCCAGATGTATTCACTATGCAATGGTTTCTTACATTATACGCGACATGGCTGCCT
CGTGAGTCGTTGTTGAGAATTTGGGACTTAATCTTACTTGATGGCAATGAAGTTTTGTTA
CTGACTGCTTTGGCAATTTGGGATATGCTTCAGGACCGAATTCTATCAGCGCGGTCTGCA
GACGAGTTCTACAGCTGTATGGGTGGCGGTGTGGGAGCTGTATGGGAAGCTGGAGAATCT
TTGGTAGTGCGGGTTGTTGCGTTTAACTCTGTCCCAGAATTGCCAAGATTACGCAGTCTA
CATAGATACAGAGTAACACCGCCAGCACCTCCAAATGCACCTCCAGTATTTCACCCCCCT
TTGCAATCAGCAATGCAGTCTATGACTAAGCGAGGATTAAGACTTTTCTATTCAGAAGAC
GAAGGAGAGTCTAGTGACGAAGGAAATAAAATGGCTTTAGCAACGGTGGCTACAAGACGA
GAACAGAGACCTGGTGCTGGTGATAGGTTATCTCTCGATATTGGAGCCTTAAAACGACAA
TATGCTCGACTTCGTGAGAGGCAGCGACAGGCTCATGTCATTTTAGCGGCGGCCTGCGCG
CGTCACGCAGCTGTTGGTGTCCCGACTTCGCCAACATCCCTTACAGTCAACAACCTTCTC
CTGGGAAAAAGTGCTATTGTAAGTTCAAGAGGACGAAGACTTGGACCTCCTCCGGGTGCA
GTACCACCATCTCGTCAAACTACAAATTCTAATGAAAAATTCGAACGGTACAGTAGCAGA
TCTTCAAATGATACTATAAGTTGGGAAGAAGAAAAAACTCGCAAAACACTCAATAGGAGA
AATTCTGTAAAATGGAAAGATATAAAAAAAGATACGGCCTTAGAATTTGCTAGAAAACCA
TCTATTGATTTAGATGAATCTGGAGATGGAATTATTGTCTCTGAAATAGAAGCAAATCAA
ATGATTGCATCGATGAGATCACGAAGTTCTAGTGAAACATCGTCATATTCTTCGCGGTCT
GAATCTAGTACAGACACAAGTCTTTGTGATGAAAATGAAAAAGCTAGTGATTCTGAAGCC
GATTTACCCAATGATGATAAAGAAAATAATATAAATAGCACGAAAAACAAAATAAATTTA
CCCACAAACTCGCCCCCTTTGTACATAGAAAAGCAAAACAATGTATTGCCTTCTTCTAAA
GACACGTCAATGCTACCATCGCCTACTTCAAACCAAAAATCTAATTCAGACGATCAAAGT
GTAAAGAATATAACGGATTATCTTGGCTCCGCTGCCGGGGAGCCATTACGCGTTTATATA
GATGGGTTTGAAATGAAATTAAAAGACACTCAAATGGTTAACAATGACAGCAAATCCTAT
ACAGTTGTTAGTCCACTTAAACCCGTTCATTCACCACAGATAGACGTTGAAAGCAATAAT
TCATTTAAACACTTACAATATGAGCATAGGAATAATAAAAAAAATACAAATTTATTAAAA
TCCAAAAATAAAATACACCTAAGTCCCATCGACTTGTCCCCTCATAATTGTGTAAGAAAA
TTTCATGCACCTACAAAAAATCACAATAAATTAGAAACAGTATCCTCAAATAAACGTGAT
GATGTTTCATATACATCTCCAGATATAATCGATACTTTTGCAAGCTACCCGAATTTCGTA
CCCGATATTGACTTGTCTGATAAATATATGTCAGACCCAGAAAGTCCCTTGAGAAGCCCT
GAATCCGAAAGCCTCATTGTCAGTGAAGATGAACCTCCTATTCCATTAAAAGTAGATAAA
TATTTTGAACATAGCCCTGAATTTTTCGGAGCACGATTAACTGATCCTCACAGTTCAAAC
ATACCGAGTAGACGAGCTACGAAAAGAAATTCACGTTTACCTAAAAAAACAGACTCTTTA
ACTCACAACAGTGGAAAAAATGTTAAAAACGATGCAGAGAGAGCTTCATCTCTGCCACAA
CCTCATACTTTTGTATGTAAAAAGTCTGTAAGTCCAGAAGTAAAGGAAGAGAAAAAAGAA
GGCCATAAATTAAGGAAAAAGTCATTTCAACACACTGAACACGTAGAAAAAGATTTTCAA
AAACCTATTATTGAAGATATTGTAATAGATAAAGTAAATGAAAGCCCTCCATGTGTCAAA
GAGTATGTACTAAAATCAGGCCGAAAAAATAGCGAAAGAGCTTTACAAATTATACAAGAA
AATTCACAAATATTGAGCAGAATTTTAACAAAACAAAACTCTAATGCAGCAGCTAAAGAA
AAAGAAATTATAGATACTACAAAAACAAAATTAGTCGAAGACGACGTAACACCTACCAAC
ACAAGTAAAATAATAACGGATTTTTCTTTAGTCAAAGACAGCGCTGCTAAACTTAACTTA
CTTAAAGAATCTACATCTGATTCTTTGATTGGTTGTTTAAGAAGACCTTCAAGAGGCGAA
CCAGATGATAAAAATGATTTTCTTAGAGAAAGACCTATATCAATTGATGACCCTTTTTCT
TTTGAAATTCGTAATGTCTTAACATCAAACGATGAATTTGATATTAAAAATTTAAAAACA
CCGAGCATTGAATGCCTCGTAAATAAACCAGATTATTACGGTTGGGAAAATAAGGGGTTC
TTAGCAAAATGTGATTTTCGAAGCAATCTAAATCGACAAGAAATTTCGGAGGATGAATAC
AAAAAGAGAACCAACATCATTTGTCATGATTCGCAGCATAGCATAAGGAATCAAAATAAT
TTAAAAGGAGACTGGTCCAGTTGCTCATTTTCAGAGGAGTCGAAAATATCAGTCACACTT
CCTTCATCAGAAATGAAGGACACTTCATCATTTGATCGTCGCTACACTTCGGACGATTAT
AACTATCCTATGACGAATTCCAGCAAATATAATGATTTTGTTATATCAAAGGCTAGTGAT
ATATGTAGTAAAATAATAGATCGAAGTCCTAAAATTAGCGATAATGTAATAAAAACCGAA
AATAGTCAATTTAGTGACTTTTCACACAAGGTTACATCATCTATTAGTTTTACATGTGAA
CCATCAATGGAAGACGATTCTCCAATGGGTGCAAAAAGTAATTCTAGTGATACATTGTGT
CAAATTACGTCTTTAGATCAAATATCTACACCTATATCACCAAAAACTTTTCCCAATAGA
GACACACCAAATTTGCCTAAAGATTCAGAATCAGACGATACTTGCAGCGCCATTACTTCT
CTTCTAGAAACGGATACATTATCTTCTTTGTCTTACCCTCGCAGTCCATCGACTGGATCT
TACCACCCTTTTCCGACGAGACCTGCTATTCGTCTGCCAAAAGATCTTGGAATTAAACTA
GGAATGTATCCTAAAGAATCTTTTCCTTCTCCGCAGAAATGA
Protein sequence:
MKTITITEPINLRVVKFELDFSSLYDYKPKHRKKSKAINVPHINCEKKQNEIPNPPEIQC
KQKKQNVKELVEELLNDIYADHRDWTTISGHGSTAASFTSSQSNCGEQSDFIEISYLESL
DINELKDQVLEWKRCLQVAGERLAKCLRLRDRLHRQQKKLCAAFTVILRHLRQMSAILNS
LRNLASSAKTASAGDANIRFGVTPGSEAPGEGGFTEWLHAMRLVARLPAGVPQHFRRKLW
LTLAERHLTARGVDWPAAERACFRGTAQPDDTELSAQILKDLHRTGCSLFCGVEGRENQA
MLRRVLLAYARWNKDVGYCQGFNMLAAIILEVMDKSESDSLKVMIYLVEAVLPEGYFADD
LRGLSADMAAFRDLLRLRLPRLAQHMDHLQRISDGGGVEPPLPDVFTMQWFLTLYATWLP
RESLLRIWDLILLDGNEVLLLTALAIWDMLQDRILSARSADEFYSCMGGGVGAVWEAGES
LVVRVVAFNSVPELPRLRSLHRYRVTPPAPPNAPPVFHPPLQSAMQSMTKRGLRLFYSED
EGESSDEGNKMALATVATRREQRPGAGDRLSLDIGALKRQYARLRERQRQAHVILAAACA
RHAAVGVPTSPTSLTVNNLLLGKSAIVSSRGRRLGPPPGAVPPSRQTTNSNEKFERYSSR
SSNDTISWEEEKTRKTLNRRNSVKWKDIKKDTALEFARKPSIDLDESGDGIIVSEIEANQ
MIASMRSRSSSETSSYSSRSESSTDTSLCDENEKASDSEADLPNDDKENNINSTKNKINL
PTNSPPLYIEKQNNVLPSSKDTSMLPSPTSNQKSNSDDQSVKNITDYLGSAAGEPLRVYI
DGFEMKLKDTQMVNNDSKSYTVVSPLKPVHSPQIDVESNNSFKHLQYEHRNNKKNTNLLK
SKNKIHLSPIDLSPHNCVRKFHAPTKNHNKLETVSSNKRDDVSYTSPDIIDTFASYPNFV
PDIDLSDKYMSDPESPLRSPESESLIVSEDEPPIPLKVDKYFEHSPEFFGARLTDPHSSN
IPSRRATKRNSRLPKKTDSLTHNSGKNVKNDAERASSLPQPHTFVCKKSVSPEVKEEKKE
GHKLRKKSFQHTEHVEKDFQKPIIEDIVIDKVNESPPCVKEYVLKSGRKNSERALQIIQE
NSQILSRILTKQNSNAAAKEKEIIDTTKTKLVEDDVTPTNTSKIITDFSLVKDSAAKLNL
LKESTSDSLIGCLRRPSRGEPDDKNDFLRERPISIDDPFSFEIRNVLTSNDEFDIKNLKT
PSIECLVNKPDYYGWENKGFLAKCDFRSNLNRQEISEDEYKKRTNIICHDSQHSIRNQNN
LKGDWSSCSFSEESKISVTLPSSEMKDTSSFDRRYTSDDYNYPMTNSSKYNDFVISKASD
ICSKIIDRSPKISDNVIKTENSQFSDFSHKVTSSISFTCEPSMEDDSPMGAKSNSSDTLC
QITSLDQISTPISPKTFPNRDTPNLPKDSESDDTCSAITSLLETDTLSSLSYPRSPSTGS
YHPFPTRPAIRLPKDLGIKLGMYPKESFPSPQK