| New model in OGS2.0 | DPOGS210669 |
|---|---|
| Genomic Position | scaffold2522:- 320-8084 |
| See gene structure | |
| CDS Length | 1869 |
| Paired RNAseq reads | 792 |
| Single RNAseq reads | 2513 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006250 (6e-14) |
| Best Drosophila hit | Cad99C (0.0) |
| Best Human hit | protocadherin-15 isoform CD1-7 precursor (4e-35) |
| Best NR hit (blastp) | PREDICTED: similar to cadherin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | protocadherin-15 precursor, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0016339 calcium-dependent cell-cell adhesion GO:0005887 integral to plasma membrane GO:0007156 homophilic cell adhesion GO:0048100 wing disc anterior/posterior pattern formation GO:0016021 integral to membrane GO:0005509 calcium ion binding GO:0007155 cell adhesion GO:0007224 smoothened signaling pathway GO:0007304 chorion-containing eggshell formation GO:0005902 microvillus GO:0032529 follicle cell microvillus organization GO:0032533 regulation of follicle cell microvillus length GO:0016324 apical plasma membrane GO:0007305 vitelline membrane formation in chorion-containing eggshell |
| InterPro families | IPR002126 Cadherin IPR015919 Cadherin-like IPR020894 Cadherin conserved site |
| Orthology group | MCL12011 |
Nucleotide sequence:
ATGGCGCGGCGGAGCGCGCTTCTCCGGCAAACCACAATCTGGCTTTTAGTTATTCTCCTC
TCATCAGCATGGGCGACGCCAGGACCATGCGAAGTGGAGACAGGCCAATCAAGCATTATA
GTTGATATTGAAGAAAGCAGAGGGGAACAGGTCAACCAAACTACAATACCAGCGGAGTTA
CCAATAGTCGGTGAGCCAGATGTAGACGTCATTTTATCAACAGTTTTTCCTAAAGGTCCA
ACGCTTTTTGAGCTCGACGGCAAACGTCTCCAGCTACTTCAACCCTTGGATAGGGATGCT
GATAACTTATCACATATGGTATTCCAGCTGGTATGCCAAGTGAAAGCGACCAAGAAGAGG
CGAACTATCCCCGTAATCGTAAGAGTGTCGGATATAAACGATAATGCACCGGTATTTCAA
GGCACGCCCTATGAAACTAGTATATCAGAGTTAATACCTATCGGTTCGACGATATTCGAC
GGTATACGTGCATTGGATCCTGATGCTGGTGTGAATGGTTTAGCTGAATACTTTATAATA
CCTGGTGATAATAAAACGCTGGAGGCTGCTAACGCGGCCGATGGTTACACGAACTTCGAG
ATCCCAATACCTCACCAGGGTCAAGTCACTGTGAACAGGAGTTTAGATTACGAACGGACA
CAGAAGTATCTAGTCACTATTGTTGCTTCTGATCGAGCTCGCGATACCAAACGCCGTCTC
TCCAGTACCACCACGTTGACGGTGAATGTTCAGGACGGGGACGACCAGGATCCGTCCTTT
ATATACAAAGGCTGCACATTACATGACGGAGTTTGTATCAACCCTGAGTACAACACTTAC
GTAAACGGTGGTGTACTCGCTGGTATACTGACGATAGAACCTGAGAAGATTCAAGCCGTG
GACATGGACACTCTGAACGCTCGTATAAAATATACTATAGAGAGCGGCGAACCCGATTCA
TGGGCGAGTTACTTTGATATAGATCAAAGTACAGGCGCCGTGAGGCAACTTGTGCCTGTC
GATACAAGTATTGCTAAGAAATTCCAATTAGTTATTAAGGCGGAAGAGATATCGGAAGCG
AAACGGTTCACAACAGCCAAATTGACAATAACAGTGAGACCTATAGACGCAAGTCCACCG
GTAGTGACGTCATCGTCAGATGAAGGGCAGGTTGAAGAAAACTCTCCCAAAGGGACCAAA
GTGCTGGATAAATCTGGAAATCCTATCAGATTGACAGTATCTGATCCTGACTTGGGTCCC
GGAGATCCGATACCGGCCTACAAATTTGAGTCAACGACAAGCTTCTTTGATATCGACAAA
GACGGGTACCTCGTAGTTAGCGACGATAGATTAGATCGCGACCCACCAAACAAAGATAGA
CTTAGATTTCAGGTGGAAGCTACAGACATAGACGAGGGTGAGAACGCTCGTATCAGTTAC
AGTATATACCACGTGTCTAACAACGGGGGTAACAAGTTCACTATAGATCCAAACACTGGT
GTTATATCGAGCACCGGTCGTCTACAAGCTGGTGAACAGTACAGTGTCACAGTGAGGGCC
GCTGACTCGAAAAGATTGAGTTCCCAAGGCATCATTGAGCTAGTGGTAGCCCCCGGACCC
AATACACGCCCACCACAATTCAGTTCAAGGGATTACTTCGCACCGGTGTCTGAAGGAGCC
GCTATCAACTCAACTGTTACCACCGTCACAGCCAAAGATCCTGAGAATGAACCTGTTACA
TACTCAATAGCGTCTGGGAACGATCTGCGTCAATTCGCCATCGGCTCCAACACTGGCATC
ATAACAGTTATAAGACATTTAGATAGAGAAGTACTCACGAGGTATCAGCTGGTAAGTAGA
AACGTATGA
Protein sequence:
MARRSALLRQTTIWLLVILLSSAWATPGPCEVETGQSSIIVDIEESRGEQVNQTTIPAEL
PIVGEPDVDVILSTVFPKGPTLFELDGKRLQLLQPLDRDADNLSHMVFQLVCQVKATKKR
RTIPVIVRVSDINDNAPVFQGTPYETSISELIPIGSTIFDGIRALDPDAGVNGLAEYFII
PGDNKTLEAANAADGYTNFEIPIPHQGQVTVNRSLDYERTQKYLVTIVASDRARDTKRRL
SSTTTLTVNVQDGDDQDPSFIYKGCTLHDGVCINPEYNTYVNGGVLAGILTIEPEKIQAV
DMDTLNARIKYTIESGEPDSWASYFDIDQSTGAVRQLVPVDTSIAKKFQLVIKAEEISEA
KRFTTAKLTITVRPIDASPPVVTSSSDEGQVEENSPKGTKVLDKSGNPIRLTVSDPDLGP
GDPIPAYKFESTTSFFDIDKDGYLVVSDDRLDRDPPNKDRLRFQVEATDIDEGENARISY
SIYHVSNNGGNKFTIDPNTGVISSTGRLQAGEQYSVTVRAADSKRLSSQGIIELVVAPGP
NTRPPQFSSRDYFAPVSEGAAINSTVTTVTAKDPENEPVTYSIASGNDLRQFAIGSNTGI
ITVIRHLDREVLTRYQLVSRNV