| New model in OGS2.0 | DPOGS213631 |
|---|---|
| Genomic Position | scaffold252:- 29224-31857 |
| See gene structure | |
| CDS Length | 2301 |
| Paired RNAseq reads | 1018 |
| Single RNAseq reads | 2497 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008184 (4e-14) |
| Best Drosophila hit | crooked legs, isoform B (6e-21) |
| Best Human hit | zinc finger protein 62 homolog isoform 2 (3e-25) |
| Best NR hit (blastp) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (2e-32) |
| Best NR hit (blastx) | mCG1039360 [Mus musculus] (5e-46) |
| GeneOntology terms | GO:0005634 nucleus GO:0046872 metal ion binding GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL40238 |
Nucleotide sequence:
ATGTCAATATTAGAAGATAGAGTCGATGTCAAAGACATCAAAGTTGAAAGAATCGAAGAA
GATCGTAAAGATCCAACTACCTTCCTACCAGATGAACCAATGACGTATGAAATAAAAACT
AAGAAGAAAAAAAAGAAAAAGAAACAAGAAGATCCCTTTAAAGATATAGAGGAAAAGATT
CCGTTAACCACTGTGACTATATACGACCCAATCACAGAAGTAAATACGGAAACGGTATTA
GATCCAGAAGTCAATATAAAGGTTGAAAACATAGAGGTTGAATTAGATTTTAATGATTTT
GCTAATGATAATGGTTTAATGGTAGAGGGCCCACAGAGTGAAGATAGTCAAGAACCCGCT
GTGAAAATCGAAGACCAAAGTCATGAAGCCGTCTTATTGACCTTTGAAAGTATAATCCAC
GACAAAAACGTCCTGGGCTTCAGCCCCGCGTCCGCGCCGGCGACGAACTACGTCTGCAAG
ATATGTCATCTAGTCTTTCAATCCCCGAAAACCCTTAGGATGCATCAGAAGAGGAAACAC
AAGGTCTTCCGCAAATCATTCAAGCATATATGTGATTACTGCGGAATGTCCTACGAACAG
AAAAACAGCCTGGTTGCCCATATTAAAAGGAAACACGGCCCGAACTCTGTCCCTGACGAT
GGTGAAGAACGAACTTGTGACGTTTGCGCGCTAGTTTTCAAGGGCATGACTAGATTGAGA
ATGCATATGAGGAGAAAACATGGGTCCTTCGAAGAATCCTTCAAACATGTCTGCCAAGAA
TGTGGTCTTACGTACGACAAGTATAGAAGTCTTATCGTACACATACAACGGAAACACAAC
AACGACAAAAAACCCGTATTGGACACGTGGTACAACTGCCCGTTCTGTCCAAAAGTTTTC
ACCAAAAGGGAAACATACGCTAGACATGTCCAAAGAAAACACAGAATCAGTGATGATGAT
GAAATGAAACACGAAAATCATGATCTAGAAAATTATAAAAACGAAGCTACAGGGGAAGTC
ACCTGTAAAGAATGTCCACTAGTGTTTTCATCGGTGACATTCCTAAAATTACATATGAGG
AGGAAACACAACGCTTTGAAAGAAGACTTCAGATTGAAATGCAAAATATGCAACTTGTCC
TACGATAAAATAGAAAGCTTAAAGCGTCACATACGAAGGAAACACGACAAGAACTCGTAC
TGCGATGTCTGCGATAAACAGTTTGAGAGCAGAGAAGTTTATCTCACTCACACGCACAAA
AGAATAGTCCAAGAATGTTCGGTTTGCAATTTAATATTCGCTACGCATCGCGGTCTCTGT
AAACATTTACGGACTACCCACAAAGTGGAACTGCCCAGGACTGTGTTCTGTGATCTGTGC
AACGAAAGTTTCCACGACAAACGACAGCTCAAACCTCATTATATGAAAGTACATTTGAAA
GCTTCGTACACATGTATCTTCTGTAAGAAGATATTCAAAGCGAAAGAGAGCTATCGCCGT
CACGTGCTCCTAAAGCATCCGGTGAACGAAAAAACATGTCTGCAGAAATGTGATCAATGC
ACAGAGAGTTTTGCTGACGAATTCGAGCTGTGCAAACATATTAACATGGCGCACAGACAG
CAGAATTCCGAGATAGGCCCACTAACTTTAATAGACATTAAAAAAGAAGAAGTGGACATA
CCAGAGACATTCCACTGTACAAAATGTTCGAATACATACAATAATTGGAATGATTTAAAA
ACGCATTACGAACAGAGTCACATATCCGTGGTCGAAACCCAGTGCCAGATATGTGGGGAG
TTGGTACCGGGCAACGAGTTGCAGAAGCACATTAAAGCAGCCCACACGGATACGTCAGTG
AGGTGCAAGTACTGCGAATTCGTTACCAACAACCGCGCTAGTATGACACAACACATGTTG
CGACATAAAAATGCAACGACAATACACTGTGATTACAGTAATTGTAAATATAAAACGTTC
TACGAGGGTGCCATGGAGAAACATAAGCGAAGGCATAGAGACCAGGGTGTTAAACTGCAA
TGTTCTCAATGTCCTTTCCAGACTATGGGCAAATATATATTGAAGTACCACGAGGAAGCC
CACAGTACGGGCAAAAAACGTTATTCGTGCGACCAGTGTGACTACGCCACTATATTGCCG
GCTAATCTAGTCCAACACAGGTACAAACATTCCTCGGAAAAGAGATTCAAGTGCGAGGTC
TGCCCGTTCGCTACAAAGTACAATACATCGTTGCGTTTCCACGTTAAAAAGAAACATTGT
GATCTCCCGACATTCAGTTAA
Protein sequence:
MSILEDRVDVKDIKVERIEEDRKDPTTFLPDEPMTYEIKTKKKKKKKKQEDPFKDIEEKI
PLTTVTIYDPITEVNTETVLDPEVNIKVENIEVELDFNDFANDNGLMVEGPQSEDSQEPA
VKIEDQSHEAVLLTFESIIHDKNVLGFSPASAPATNYVCKICHLVFQSPKTLRMHQKRKH
KVFRKSFKHICDYCGMSYEQKNSLVAHIKRKHGPNSVPDDGEERTCDVCALVFKGMTRLR
MHMRRKHGSFEESFKHVCQECGLTYDKYRSLIVHIQRKHNNDKKPVLDTWYNCPFCPKVF
TKRETYARHVQRKHRISDDDEMKHENHDLENYKNEATGEVTCKECPLVFSSVTFLKLHMR
RKHNALKEDFRLKCKICNLSYDKIESLKRHIRRKHDKNSYCDVCDKQFESREVYLTHTHK
RIVQECSVCNLIFATHRGLCKHLRTTHKVELPRTVFCDLCNESFHDKRQLKPHYMKVHLK
ASYTCIFCKKIFKAKESYRRHVLLKHPVNEKTCLQKCDQCTESFADEFELCKHINMAHRQ
QNSEIGPLTLIDIKKEEVDIPETFHCTKCSNTYNNWNDLKTHYEQSHISVVETQCQICGE
LVPGNELQKHIKAAHTDTSVRCKYCEFVTNNRASMTQHMLRHKNATTIHCDYSNCKYKTF
YEGAMEKHKRRHRDQGVKLQCSQCPFQTMGKYILKYHEEAHSTGKKRYSCDQCDYATILP
ANLVQHRYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPTFS