New model in OGS2.0 | DPOGS212447  |
---|---|
Genomic Position | scaffold2268:+ 2662-3773 |
See gene structure | |
CDS Length | 528 |
Paired RNAseq reads   | 4566 |
Single RNAseq reads   | 17103 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002907 (8e-54) |
Best Drosophila hit   | CG9027, isoform C (1e-40) |
Best Human hit | superoxide dismutase [Cu-Zn] (4e-33) |
Best NR hit (blastp)   | diapause bioclock protein [Bombyx mandarina] (8e-57) |
Best NR hit (blastx)   | diapause bioclock protein [Bombyx mandarina] (5e-59) |
GeneOntology terms    | GO:0004784 superoxide dismutase activity GO:0006801 superoxide metabolic process GO:0055114 oxidation reduction GO:0046872 metal ion binding |
InterPro families    | IPR001424 Superoxide dismutase, copper/zinc binding IPR018152 Superoxide dismutase, copper/zinc, binding site |
Orthology group | MCL16934 |
Nucleotide sequence:
ATGCTTTACCATTTGCTATTTTTGTCGGTGGCAGGCGTTATTGTATCTGCGCAGAATGTT
GGGAACGCACCGTTGAGAGCGATTGTTAAACTTTCAAGTCCCGACGGTCGTGATGTCCAT
GGAAATATTACCCTCACTCAGCTGGAGGGCAGGGTCCATGTTGAGGGTTCCATCTACGGT
TTGCCCCCAGGACAGTACGGCTTCCACGTACATGAGACTGGAGACATAACTCGAGGCTGT
ATCTCCACTGGATCGCATTTCAACCCTGAGAAGAAAGACCACGGCCATCCCAGCGATGAA
GTCCGTCACGTTGGAGACTTGGGGAACGTTGAATTTGATATGAACAGATTCAGTAACATC
AATTTCGAAGACAAATTGATCGCTTTGTACGGACCCCACAACGTTCTTGGAAGGGCAATT
GTCTTACACGAAAAGGCCGATGACTTCGGCAGATCAGACCATCCTGACTCCAGGAAGACG
GGCAACGCTGGCGGACGAGTCGCGTGTGGAGTCATCGGCATCCTGTAA
Protein sequence:
MLYHLLFLSVAGVIVSAQNVGNAPLRAIVKLSSPDGRDVHGNITLTQLEGRVHVEGSIYG
LPPGQYGFHVHETGDITRGCISTGSHFNPEKKDHGHPSDEVRHVGDLGNVEFDMNRFSNI
NFEDKLIALYGPHNVLGRAIVLHEKADDFGRSDHPDSRKTGNAGGRVACGVIGIL