DPGLEAN17554 in OGS1.0

New model in OGS2.0DPOGS212447 
Genomic Positionscaffold2268:+ 2662-3773
See gene structure
CDS Length528
Paired RNAseq reads  4566
Single RNAseq reads  17103
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002907 (8e-54)
Best Drosophila hit  CG9027, isoform C (1e-40)
Best Human hitsuperoxide dismutase [Cu-Zn] (4e-33)
Best NR hit (blastp)  diapause bioclock protein [Bombyx mandarina] (8e-57)
Best NR hit (blastx)  diapause bioclock protein [Bombyx mandarina] (5e-59)
GeneOntology terms


  
GO:0004784 superoxide dismutase activity
GO:0006801 superoxide metabolic process
GO:0055114 oxidation reduction
GO:0046872 metal ion binding
InterPro families
  
IPR001424 Superoxide dismutase, copper/zinc binding
IPR018152 Superoxide dismutase, copper/zinc, binding site
Orthology groupMCL16934

Nucleotide sequence:

ATGCTTTACCATTTGCTATTTTTGTCGGTGGCAGGCGTTATTGTATCTGCGCAGAATGTT
GGGAACGCACCGTTGAGAGCGATTGTTAAACTTTCAAGTCCCGACGGTCGTGATGTCCAT
GGAAATATTACCCTCACTCAGCTGGAGGGCAGGGTCCATGTTGAGGGTTCCATCTACGGT
TTGCCCCCAGGACAGTACGGCTTCCACGTACATGAGACTGGAGACATAACTCGAGGCTGT
ATCTCCACTGGATCGCATTTCAACCCTGAGAAGAAAGACCACGGCCATCCCAGCGATGAA
GTCCGTCACGTTGGAGACTTGGGGAACGTTGAATTTGATATGAACAGATTCAGTAACATC
AATTTCGAAGACAAATTGATCGCTTTGTACGGACCCCACAACGTTCTTGGAAGGGCAATT
GTCTTACACGAAAAGGCCGATGACTTCGGCAGATCAGACCATCCTGACTCCAGGAAGACG
GGCAACGCTGGCGGACGAGTCGCGTGTGGAGTCATCGGCATCCTGTAA

Protein sequence:

MLYHLLFLSVAGVIVSAQNVGNAPLRAIVKLSSPDGRDVHGNITLTQLEGRVHVEGSIYG
LPPGQYGFHVHETGDITRGCISTGSHFNPEKKDHGHPSDEVRHVGDLGNVEFDMNRFSNI
NFEDKLIALYGPHNVLGRAIVLHEKADDFGRSDHPDSRKTGNAGGRVACGVIGIL