New model in OGS2.0 | DPOGS214974  |
---|---|
Genomic Position | scaffold1043:- 28413-30280 |
See gene structure | |
CDS Length | 708 |
Paired RNAseq reads   | 63 |
Single RNAseq reads   | 159 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012146 (2e-45) |
Best Drosophila hit   | cuticular protein 100A (1e-05) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 48 [Bombyx mori] (4e-50) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 48 [Bombyx mori] (3e-49) |
GeneOntology terms   | ND |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL20854 |
Nucleotide sequence:
ATGATCGTCCTGATCCTGATCTTAACCTTGGAGGTTTCTCTCATTCATCAGATAGGTTAT
AACCAGAAGGCGCCCTTCACACCGGCGGAGGACGTCCTGCCGCAGGGCTCCTCTCAGGGC
TCGCAGTGGAAGGCGCAGCCCTACGACGACTATGGCAGAGAACAAGTAGGCCAGGAGGAC
TGGCGCGCCCCTTACGGCAACAACAAGGAGAGGCAGGCCACTATCCTGCATCACAAACAA
TCTCTTAGCTCCGAGGGAGCCTTCCGCTTTGAATACGCGTCCGACTCGGGTCTGGAGGCT
GGCGAGGTGATCTCCCCGGACGGGTCGAGGGTCGGAGCCTACCAGTACAAGGACCCCGCT
GGACAACTCGTTAAACTCAAGTATCGCGCTGGGAAGGAGGGATTTCAGATCCTTGAAGGC
AGTCACGTCCCGAAGAGTCCAGAGCCTGTAGCACCTCCAACACAAGGAAGCTACTACCCG
GACCCGTACCAGCAGCAGCAGCATTACCAGCAGGAGCAGAGTCCCGACTGGAGACAGGTT
CCGCAGGTCCCCCAGGCCCCGCAGGCAGCCGCGGTGCCTCCTCCTCAGTACTACAACCAG
AACTGGAAGACAGACGGACGGAGCGACGGACATTACAATGAACTCGAAGAGCAGAACCGA
GGCCCGCACTCGTTCGGCACGGGATACGCGTTCGCCTTCAAGGGCTGA
Protein sequence:
MIVLILILTLEVSLIHQIGYNQKAPFTPAEDVLPQGSSQGSQWKAQPYDDYGREQVGQED
WRAPYGNNKERQATILHHKQSLSSEGAFRFEYASDSGLEAGEVISPDGSRVGAYQYKDPA
GQLVKLKYRAGKEGFQILEGSHVPKSPEPVAPPTQGSYYPDPYQQQQHYQQEQSPDWRQV
PQVPQAPQAAAVPPPQYYNQNWKTDGRSDGHYNELEEQNRGPHSFGTGYAFAFKG