| New model in OGS2.0 | DPOGS213220 |
|---|---|
| Genomic Position | scaffold1131:+ 32929-39011 |
| See gene structure | |
| CDS Length | 2421 |
| Paired RNAseq reads | 1530 |
| Single RNAseq reads | 4029 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007414 (5e-102) |
| Best Drosophila hit | p115 (0.0) |
| Best Human hit | general vesicular transport factor p115 (3e-175) |
| Best NR hit (blastp) | PREDICTED: similar to vesicle docking protein P115 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to vesicle docking protein P115 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006904 vesicle docking involved in exocytosis GO:0005795 Golgi stack GO:0005783 endoplasmic reticulum GO:0007030 Golgi organization GO:0048280 vesicle fusion with Golgi apparatus GO:0005488 binding GO:0000139 Golgi membrane GO:0006886 intracellular protein transport GO:0008565 protein transporter activity |
| InterPro families | IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical IPR006953 Uso1/p115-like vesicle tethering protein, head region IPR006955 Uso1/p115-like vesicle tethering protein, C-terminal |
| Orthology group | MCL14257 |
Nucleotide sequence:
ATGGATTTTCTTAAAAGCGGTCTCAAAACAGTCCTCGGAACACCGGAGTCTGGTCAACAA
CCATCGGTCGCTGAAACGGTTGAGCGTTTGGTAGAAAGAGCAAGTAATTCCACCCTCCTG
GAAGATCGTAGAGATGCTTGCCGGGCATTGAAAGCTATGTCCAGGAAATACAGGCTTGAA
GTTGGTGCTCAAGGGTTAGATACTCTGAGACAGATTTTAGAATTAGACAGAGCAGACAAC
GAAACTGTGAACTATGCGTTGGACACGTTAAACAATATTGTGTCTCCGGCTCAATTTGAG
GAAGAAGAGGATAAACCTCACATACCAATGAACATCGGCGACCAGTTCACGGAAATGTTC
ATCAAAGACCCGCACAATATACAATTAGTGTTGGATCTTCTCGACGAATATGACTTCCGA
GTTAGGTTGTCTGCGGTGCAGCTTCTCGTGTCCGTGCTCACAAACAGAACCAAGGACATC
CAAGAGATCATTCTAGATAAGCCAATGGGTGTGTCCAAAATGATGGATCTCTTAGCAGAC
ACGAGGGAAGTCATCCGAAACGAAACACTGTTGTTGCTGATCAAATTGACGAAGGGCAAT
GCGAACATACAGAAGATTGTGGCCTTCGAGAACGCCTTCGACAGACTGTTCGAGATAGTG
ACCAGCGAAGGATATTCAGATGGGGGGATCATCGTGGAAGACTGTCTGTTGCTGATGTTG
AATCTGTTAAAGAATAACAGCAGCAATATAAATTTTTTCAAAGAGGGTAGTTACATACAG
AAGATGTTGCCGATGTTCAACATTCCGGAGAACTCTGAAGAGGTCGGCTGGTCGCCACAG
AAAGTTGTTAACGTGCATTGTATGCTGCAGCTGGTGAGGACTCTGGTGTCCCCCAGCAAC
TCTATCCAGATTATATCGAGTTGTCAGAAAATTATGAAAAATGTCGGTCTCTTGGATGCG
CTATGTAACATCCTCATGGCGAGTGGAGTGCCAGCGGACATACTGACGGAGACGATCAAC
ACTGTTGGTGAAGTGGTCAGAGGCGACGCCACTAACCAGGACTTCATAGGAAACGTCATC
GCACCGTCGTATCCCCCGCGGCCGGCGATTATAGTGCTCTTGATGTCTATGGTCAACGAG
AAACAGCCTTTTGCATTGAGATGCGCCGTGCTGTATTGCTTCCAATGTTATCTATATCAC
AACGAGAGCAGCCAGTCTAACTTGGTCCAGACGTTGCTGCCGTCGTCGTCGGACGTGTCG
AGCCTGACGAGCGGTCAGATCCTCTGCGGGGGTCTGTTCTCGTCGGACGTGCTGTCGAAC
TGGTTTTCAGCCGTGGCCTTGAAGCACGCGCTCATCGATAACCCCACGCAGAAGGAACAG
GCGCTAAGAGTGTTACTCGCTACCAACATAGGCAGCACGCCGGTGTCGCTGCTCCACCAA
TGTACTCTGCTGCTGCAGCAAACCACCAAGCTACAGTCCAAGGTAGCTCTCCTCATGTTG
CTGTCGACGTGGACGGCGGGCTGTTCCGGGGCCGTGGCGGCGTTCCTGGCGGCCCCGGGC
GGAGTCCCGCTGCTGGTGCATCACGCCGGGAGCAACGAACACGACGACAACGAGTACCTG
CTGCAAGGTCTGTCAGCGTTCCTGCTGGCTATATGTATCCACTTCAACGACGACTCGGTG
GCCACCTACAGCAGGGACGCCCTCAAGCAGTTGCTGGTGAAGCGGATCGGCATGGAGACG
TTCGTGGCCAAGCTGAGCGACGTGTCCAAACACGAACTCTACAACAGGGCCGCCAAACAT
CCGCAACTGAGAGTCGCCTCGCCCTCAGACGTGCTCATCGACTACGAGTTCTGCAAACTC
TTCAAGAGTCTAGAAGGCCCCCTAATGGAGAGCGTGTCTATGAGTCCGGGCAGGTCGTCC
CCGGAGCCCCAGCTGGAGCAGTACAAGTCCCTGATCCGTCAACAAGACGCACGCCTCCAG
GAGCTGGTGCAGCAGCTGGAGACGCTCACGGCACACGCACAAAACCTCCAGGGCGCTCTG
AACGAGGCTCAGTCAGCCAACTCCCTGCTCAGAGACGAGAACACACTGCTCAAGGCGCAG
GTCGGGAACTCCGGCTCGGACCACGAGGACAGGATACGACAGCTGACCGGGGAGGTGGCC
AGGCTCAAGGAGGAGTTGGAGGGAGTCAGGAGGAGTCACAGCGCCAGGGACGAGGAGCTG
GAGAAGATGAAGAGGGACCAGAACGATCTGTTGGAGCTACTGGACGATCAGGATTTGAAA
TTGACGGAATACAAAATGAGGTTAATAAATCTCGGCCAATCTATAGACGAAGACAATGTC
GTCGAGCCCGAAGATAACCCGAGTCGTGTAAATAACAAAACAGTCGACGGAACAGATTAC
ATCGTGACCCCGCCTTTATAG
Protein sequence:
MDFLKSGLKTVLGTPESGQQPSVAETVERLVERASNSTLLEDRRDACRALKAMSRKYRLE
VGAQGLDTLRQILELDRADNETVNYALDTLNNIVSPAQFEEEEDKPHIPMNIGDQFTEMF
IKDPHNIQLVLDLLDEYDFRVRLSAVQLLVSVLTNRTKDIQEIILDKPMGVSKMMDLLAD
TREVIRNETLLLLIKLTKGNANIQKIVAFENAFDRLFEIVTSEGYSDGGIIVEDCLLLML
NLLKNNSSNINFFKEGSYIQKMLPMFNIPENSEEVGWSPQKVVNVHCMLQLVRTLVSPSN
SIQIISSCQKIMKNVGLLDALCNILMASGVPADILTETINTVGEVVRGDATNQDFIGNVI
APSYPPRPAIIVLLMSMVNEKQPFALRCAVLYCFQCYLYHNESSQSNLVQTLLPSSSDVS
SLTSGQILCGGLFSSDVLSNWFSAVALKHALIDNPTQKEQALRVLLATNIGSTPVSLLHQ
CTLLLQQTTKLQSKVALLMLLSTWTAGCSGAVAAFLAAPGGVPLLVHHAGSNEHDDNEYL
LQGLSAFLLAICIHFNDDSVATYSRDALKQLLVKRIGMETFVAKLSDVSKHELYNRAAKH
PQLRVASPSDVLIDYEFCKLFKSLEGPLMESVSMSPGRSSPEPQLEQYKSLIRQQDARLQ
ELVQQLETLTAHAQNLQGALNEAQSANSLLRDENTLLKAQVGNSGSDHEDRIRQLTGEVA
RLKEELEGVRRSHSARDEELEKMKRDQNDLLELLDDQDLKLTEYKMRLINLGQSIDEDNV
VEPEDNPSRVNNKTVDGTDYIVTPPL