| New model in OGS2.0 | DPOGS215646 |
|---|---|
| Genomic Position | scaffold2046:- 23617-25654 |
| See gene structure | |
| CDS Length | 1185 |
| Paired RNAseq reads | 446 |
| Single RNAseq reads | 1144 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003545 (1e-113) |
| Best Drosophila hit | will die slowly (1e-11) |
| Best Human hit | proteasomal ATPase-associated factor 1 (1e-45) |
| Best NR hit (blastp) | WD-repeat protein, putative [Ixodes scapularis] (3e-66) |
| Best NR hit (blastx) | WD-repeat protein, putative [Ixodes scapularis] (2e-63) |
| GeneOntology terms | GO:0005515 protein binding GO:0000502 proteasome complex |
| InterPro families | IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR019775 WD40 repeat, conserved site |
| Orthology group | MCL21942 |
Nucleotide sequence:
ATGTCTAAATTATATCCTGTTATTAATATTCAGTGTGACTGGCATGATGCTTTAAGATTG
CCTAAATCAGAAGCTTGGATATCAGCTAAATACTTGAACACAAATAGTATTCATGAAAAA
ATAACAACAGCGATCAATCAGTCAGATGGAAAAGTCAAAATCAATGTACCGGAGAGCTAT
CAACTTATCTTAAAGAATAATTTAACTCTTCTTTTAAGACACAATGACTCAGGTTTGAAA
GTAGCTTTTGTTGCATGTACAAAAGCCCATGATGTGCACAAGAAATCCATACTATCAGTG
TCAACAGCTGATAGTGCTCTGGTAGTGTCTTCATGTGAACAAGACAAACTACTAGTGTGG
GATAGCAGAACAAATGAACAGCTCTTGGATCTAAAGGGACATGGAGGGCCGGTGTACAAG
TGCAGATTCTTTCCGTCTGGTATTGTTGTTCTTTCTGCTGGGGCTGATGGCTCCTGTAGG
ATCTGGTCAGCTGAATCTGGAATAAATCCCGTCACATTAAAGGGTCATAAAATGGCTATA
ATGGATGTCAGTATCGTTGATAAGGGACGTAATGTAATCTCTGTTAGTAAGGATGGATTA
GCTAAACTCTGGGATGTCGGTGAATCGAACTGTTTAGACAACATTATTGAGGCTCCGGGA
CCTATAAATTGTTGTGCTGTTACAAGTACCGCTGATGAGGTTGATGTTGAGAATGAAAGA
GAGGTAGCAACAGGTAACAAGCTATTAGTAGTTGGCTGTGAAAATGGCTCAGTGATATGT
GCTCATGTTGGAAAGAGACAGGAATTGTATAGGATACAAATGGAGGCAGCTTGTAACGCC
TGTGACATTGTTGACAAAACTGTTATCTTAGGAGCTAGCGATGGAAAGGTGATATTCTTG
AGTGTACTAGATGGTGCTATTGTAAAAGAAATTCATGAATCTGCGAGCCCAGTTCTGAGT
ATAAAAACCTTAAGTGATGACTTGTTTGTGGTTGGAAGACAGGATGGTAACTGTTCTGTG
ATGTCAATACTAGAAGCTCACAATAATCTAAGGGTCCAACTTACTGGTTCAGATTGTGAT
GGGATAAGAGATATCGCCTTTAACGGCAAATGGGTTTTTGTTGGTTGTCGTGACACATAT
ATTAGGAAATATGACTTCAACCAGATTAATGTGCACTTTAAGTAA
Protein sequence:
MSKLYPVINIQCDWHDALRLPKSEAWISAKYLNTNSIHEKITTAINQSDGKVKINVPESY
QLILKNNLTLLLRHNDSGLKVAFVACTKAHDVHKKSILSVSTADSALVVSSCEQDKLLVW
DSRTNEQLLDLKGHGGPVYKCRFFPSGIVVLSAGADGSCRIWSAESGINPVTLKGHKMAI
MDVSIVDKGRNVISVSKDGLAKLWDVGESNCLDNIIEAPGPINCCAVTSTADEVDVENER
EVATGNKLLVVGCENGSVICAHVGKRQELYRIQMEAACNACDIVDKTVILGASDGKVIFL
SVLDGAIVKEIHESASPVLSIKTLSDDLFVVGRQDGNCSVMSILEAHNNLRVQLTGSDCD
GIRDIAFNGKWVFVGCRDTYIRKYDFNQINVHFK