New model in OGS2.0 | DPOGS215647  |
---|---|
Genomic Position | scaffold2046:- 10452-15632 |
See gene structure | |
CDS Length | 810 |
Paired RNAseq reads   | 218 |
Single RNAseq reads   | 660 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003546 (2e-109) |
Best Drosophila hit   | brain washing (1e-85) |
Best Human hit | alkaline ceramidase 2 (1e-64) |
Best NR hit (blastp)   | PREDICTED: similar to brain washing CG13969-PA [Apis mellifera] (7e-98) |
Best NR hit (blastx)   | PREDICTED: similar to brain washing CG13969-PA [Apis mellifera] (7e-100) |
GeneOntology terms    | GO:0007420 brain development GO:0016021 integral to membrane GO:0006665 sphingolipid metabolic process GO:0017040 ceramidase activity GO:0046514 ceramide catabolic process GO:0019216 regulation of lipid metabolic process GO:0005783 endoplasmic reticulum |
InterPro families   | IPR008901 Ceramidase |
Orthology group | MCL15523 |
Nucleotide sequence:
ATGTGGTCGCATTTAGAACGTGGCAGTTCTCCAGTAGATTGGTGTGAATCCAATTATTCT
ATATCGCCTGTAATAGCTGAATTTGTTAATACGATAAGTAACATTCTATTCTTTTTGTTC
CCGCCAGTATTGATACATTTATTTCAAGAATATGCTAGATTTTTTAACCCAGCAATCAAT
GTACTGTGGGTGTTATTAATGGTGGTTGGTATCAGTTCTGCCTACTTTCACGCTACCCTG
AGTTTAGTGGGGCAACTGCTCGATGAACTGGCTATACTATGGGTTTTCATGGCAGCCTTT
GCTATGTTCCTACCAAAGAGACATTTCCCCAGATTCTTGGGGGGTAATAGACGAGTACTG
GCATTCTACTCGAGCGTGTTTTCGGTAGTCTCTACAGGCTTCCTTGTAATGCATCCAAAG
GCTAACGCCTTCGCACTAATGATGCTCGCATTCCCGGCCATCGGGTTTCTGTGTAAAGAA
TTAAACAGAGTAAAATGTGCCCGTGTGTATCGTCTCGGTCTACGCTGCGTCGCGGTGTGC
TGCCTCGCGATATTCTCCTGGATCATTGACAGAATGTTCTGTGACGCGTGGCTCTCCATA
GACTTCCCGTACATGCACGGTGTATGGCACATCCTTATATTCATAGCTAGTTATACAGCG
TTGGTACTGTTTGCATACTTCAACGTGTCCGAAGAAAGACCCGAGCAAAAACCCGAATTG
AGATACTGGCCCAGGAACGACTTTGAACTGGGCATACCATATATAACTATAAAACATCCG
TGCAAAAAAGACAAACATCTTGCTATATAA
Protein sequence:
MWSHLERGSSPVDWCESNYSISPVIAEFVNTISNILFFLFPPVLIHLFQEYARFFNPAIN
VLWVLLMVVGISSAYFHATLSLVGQLLDELAILWVFMAAFAMFLPKRHFPRFLGGNRRVL
AFYSSVFSVVSTGFLVMHPKANAFALMMLAFPAIGFLCKELNRVKCARVYRLGLRCVAVC
CLAIFSWIIDRMFCDAWLSIDFPYMHGVWHILIFIASYTALVLFAYFNVSEERPEQKPEL
RYWPRNDFELGIPYITIKHPCKKDKHLAI