New model in OGS2.0 | DPOGS215767  |
---|---|
Genomic Position | scaffold2046:+ 26387-31198 |
See gene structure | |
CDS Length | 1425 |
Paired RNAseq reads   | 540 |
Single RNAseq reads   | 1782 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003644 (0.0) |
Best Drosophila hit   | CG5734 (2e-50) |
Best Human hit | sorting nexin-17 (4e-69) |
Best NR hit (blastp)   | PREDICTED: similar to sorting nexin [Tribolium castaneum] (1e-106) |
Best NR hit (blastx)   | PREDICTED: similar to sorting nexin [Tribolium castaneum] (2e-99) |
GeneOntology terms    | GO:0035091 phosphoinositide binding GO:0007165 signal transduction GO:0005515 protein binding GO:0007154 cell communication GO:0006810 transport GO:0005737 cytoplasm GO:0015031 protein transport GO:0005768 endosome |
InterPro families   | IPR001683 Phox homologous domain |
Orthology group | MCL13969 |
Nucleotide sequence:
ATGCATTTTTCTATCCCTGATTTACAACAATTTCGCGATGACAATGGAATCACTTACACA
GGCTACAATGTCTACATCGATGGATTCTTTCACTGCACGGCTCGATACAAACAGCTGCTT
AGCCTTCACGAACAACTGCAAGCTCAATATCCGCACTTTAAGTTACCACAGTTTCCACCT
AAGAAATTATTTTTAACTAACTCTCAGCTGGAAGAAAGAAGGACTTTGTTAGAAAAATAC
ATTCAATTAATTGGACAAAATCCTGTTTTTGCAAATTCTGGTATACTCATAACATTCCTA
TTTTCTGCTCAACAAGAAACTCATTCAGTTAGAGTGCATGTAGTGGATATAGAGGTGTCA
CTGATGAATGGTTATAGAATACCACTGTCGGTGTCCTCAACGGATAGCTCTAGTACAGTC
TTAGACATAGCATGCAACTATGTTAACCTGTCAAAAGATCTGACCAAATATTTCTCATTA
TATCTCTTTAATTGGAGCTGCGCTAAGGACAGACAGCCATGTATCAAGAAATTAGAAGAA
TATGAATCTCCCTACATATCCCAAAAGTATGTGAGGCCGGAAGACAAAATTGTGTTGCGG
AAAAGTTACTGGGATCCATGTTACGACCTAGATTTAATGATAGACAGGGTTTCACTAGAT
TTATTATATCTCCAACTCATCGAAGAACTTGATCTCGGCTGGATGGTTGCCGATCAGGGG
ACGAGGGAAATTCTAAGTGATCATGAAGCTAAGAAACAAAAGAGAGAGTACATAGAAATG
GCCCGTACGTTGAGGCACTACGGCAGTGTTCCCGCCGGTGAGGCGATTACTGAGGCTATT
AACGTCGGTGATAGTAATGGCTCTATCCGAGTAAGGGTGTCTTTGGCTTCCAAGGAACTG
ACCCTCACCAGCCTCGACACAAGACACGAACAGAGGTACAAAGTCACCAGGATGAGGTGC
TGGAGAATAACTACCTTACACACCATGGAACGTCAACAAACGAACGGACACGACTCCCTG
ATGGACGAGCCGAGTAAAAACTTCGAACTCTCCTTCGAGTATCTCATAAGCAAAGACAAT
CTCGTTTGGGTTACGCTTAGAACAGAACACGCTATATTCATAAGTGTCTGTTTACAGTCA
ATCGTGGAGGAGCTGATGCGTCAGAAGAACGGCGAAGGTCCTAAATCCCCTCGTTGTAAG
CGAGCGAGTCTGACTTACCTCCGACGTGACGGTTCAACTCACCTCATCACACCGTCATCC
TCCAGCGATACTCTCAGCTCTGCGAATGGCGATTCATCTGGCAGTTCGAGGGAATTGTTT
TCAGTACAAAAGCTAACAGAAAAATTCGCATCAGTGGCCTTCAAGACGGGCAGAGATTGT
GTTGAAAACAACGCGTTTGAGGCCATCGGTGATGAGGAGCTATAA
Protein sequence:
MHFSIPDLQQFRDDNGITYTGYNVYIDGFFHCTARYKQLLSLHEQLQAQYPHFKLPQFPP
KKLFLTNSQLEERRTLLEKYIQLIGQNPVFANSGILITFLFSAQQETHSVRVHVVDIEVS
LMNGYRIPLSVSSTDSSSTVLDIACNYVNLSKDLTKYFSLYLFNWSCAKDRQPCIKKLEE
YESPYISQKYVRPEDKIVLRKSYWDPCYDLDLMIDRVSLDLLYLQLIEELDLGWMVADQG
TREILSDHEAKKQKREYIEMARTLRHYGSVPAGEAITEAINVGDSNGSIRVRVSLASKEL
TLTSLDTRHEQRYKVTRMRCWRITTLHTMERQQTNGHDSLMDEPSKNFELSFEYLISKDN
LVWVTLRTEHAIFISVCLQSIVEELMRQKNGEGPKSPRCKRASLTYLRRDGSTHLITPSS
SSDTLSSANGDSSGSSRELFSVQKLTEKFASVAFKTGRDCVENNAFEAIGDEEL