| New model in OGS2.0 | DPOGS201096 |
|---|---|
| Genomic Position | scaffold1992:- 46141-48758 |
| See gene structure | |
| CDS Length | 1644 |
| Paired RNAseq reads | 144 |
| Single RNAseq reads | 484 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007162 (1e-47) |
| Best Drosophila hit | maternal transcript 89Ba (2e-29) |
| Best Human hit | nucleolar protein 6 alpha isoform (2e-44) |
| Best NR hit (blastp) | PREDICTED: similar to nucleolar RNA-associated protein long isoform, partial [Apis mellifera] (1e-65) |
| Best NR hit (blastx) | PREDICTED: similar to nucleolar RNA-associated protein long isoform, partial [Apis mellifera] (2e-58) |
| GeneOntology terms | GO:0006364 rRNA processing GO:0005634 nucleus GO:0005694 chromosome GO:0000794 condensed nuclear chromosome GO:0003723 RNA binding GO:0005730 nucleolus |
| InterPro families | IPR005554 Nrap protein |
| Orthology group | ND |
Nucleotide sequence:
ATGAAGCCAAAAGGTAAGCTCGGCAAAGCTATTACTGTAAATCTGGATTTGGTATGTGAG
GCAGAAGCTTATAAACTTCATCGTTTTGCACCCGACCGAAATAATTTACGAGAATCTTGG
CTTCTGGGAAACGATAAAAAGGATACCAATGAAACACTCACACCCACCCCGTACTATAAC
AGTAGTGTACTCGGAGATCTCACCGCCAATGTGAATCAGGAATTCTTAAAACAAATAATA
CTTAATAGTGAAAATTTAAAACAGGCCATTGTTTTACTTAAGATCTGGGTGAGGCAGAGG
AAGCTTAAAGTCTCCGGATATATCATTAGCATGTTGGTAGCATATTTTGTTCAAAACAAG
AGGGTTAACAACATCATGAGCAGTTACCAGATAGTGAGGAACATCTGGATTGCTTTAAAA
TCTTCCGAATGGGATGTCAAAGGAATAACTCGTAAAACATTTAATGCAACCTTTTTGGAA
GTAGCATATGAATTTTCACTTAAAAAAGAACTTGTAGATTATGAAAGAAAACATAAGATA
AAACACTTTATAGGAATAGCAACTGAAATGAGAAATTCAGTGTCAGAGGACGATACCGAA
TCTAATATTCTGAATGAAAATGGTAAAAGGCCTAAAGATTCCGACGGTCAGGCTAAAAAG
CGGATTAAAACTAAAAGTTTATACAGGCAACCGACAGCAAATGAATTGAATCGGCTTCAG
GAAACGGAACAGCTTTTCAACTCCAATCTCTTCCGTCTTCAAGTCGAAGAAGTGCTCGAA
GAAGTCAAAGTCAAAGAGAAAACCACGAAACGTTTCACGGAATGGTTTAATAATTTGAAA
ACTTACTTACTTTCAATTACAAATGACGAAACAGAGTACGACTTGAGTGAAAAATCCTTT
GAAGACAAATTAAAAATTCAAATACCGCTATGCAGAGAGATACAAAAAACAAAAGTCATT
TTCAAATTTCACAAATTCCAAGATGTCTATGTTGTAGGATCATATGCTCTGGGGTGCGGT
ATAAAATCAAAATTAATAGTTGATTTGCAAATATCCGTCCCGGCGGAGACATACGCTAAA
AACGACTCCATTAATTACAAGTACCATTTAAAACGCGCCGCTTACCTCGCTTATATTGCA
TCTTATTTGGGTAAATATGAATGTATTGACGAAATAAACTATTCTTATCTTAATAGTGAG
ACAAAACCAATCATAACGATGAAGCCAAAAGGTAAGCTCGGCAAAGCTATTACTGTAAAT
CTGGATTTGGTATGTGAGGCAGAAGCTTATAAACTTCATCGTTTTGCACCCGACCGAAAT
AATTTACGAGAATCTTGGCTTCTGGGAAACGATAAAAAGGATACCAATGAAACACTCACA
CCCACCCCGTACTATAACAGTAGTGTACTCGGAGATCTCACCGCCAATGTGAATCAGGAA
TTCTTAAAACAAATAATACTTAATAGTGAAAATTTAAAACAGGCCATTGTTTTACTTAAG
ATCTGGGTGAGGCAGAGGAAGCTTAAAGTCTCCGGATATATCATTAGCATGTTGGTAGCA
TATTTTGTTCAAAACAAGAGGGTTAACAACATCATGAGCAGTTACCAGATAGTGAGGAAC
ATCTGGATTGCTTTAAGTGAGTAA
Protein sequence:
MKPKGKLGKAITVNLDLVCEAEAYKLHRFAPDRNNLRESWLLGNDKKDTNETLTPTPYYN
SSVLGDLTANVNQEFLKQIILNSENLKQAIVLLKIWVRQRKLKVSGYIISMLVAYFVQNK
RVNNIMSSYQIVRNIWIALKSSEWDVKGITRKTFNATFLEVAYEFSLKKELVDYERKHKI
KHFIGIATEMRNSVSEDDTESNILNENGKRPKDSDGQAKKRIKTKSLYRQPTANELNRLQ
ETEQLFNSNLFRLQVEEVLEEVKVKEKTTKRFTEWFNNLKTYLLSITNDETEYDLSEKSF
EDKLKIQIPLCREIQKTKVIFKFHKFQDVYVVGSYALGCGIKSKLIVDLQISVPAETYAK
NDSINYKYHLKRAAYLAYIASYLGKYECIDEINYSYLNSETKPIITMKPKGKLGKAITVN
LDLVCEAEAYKLHRFAPDRNNLRESWLLGNDKKDTNETLTPTPYYNSSVLGDLTANVNQE
FLKQIILNSENLKQAIVLLKIWVRQRKLKVSGYIISMLVAYFVQNKRVNNIMSSYQIVRN
IWIALSE