New model in OGS2.0 | DPOGS201096  |
---|---|
Genomic Position | scaffold1992:- 40265-44580 |
See gene structure | |
CDS Length | 1671 |
Paired RNAseq reads   | 843 |
Single RNAseq reads   | 2111 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007162 (6e-127) |
Best Drosophila hit   | maternal transcript 89Ba (7e-45) |
Best Human hit | nucleolar protein 6 alpha isoform (3e-67) |
Best NR hit (blastp)   | PREDICTED: similar to nucleolar RNA-associated protein long isoform, partial [Apis mellifera] (2e-96) |
Best NR hit (blastx)   | PREDICTED: similar to nucleolar RNA-associated protein long isoform, partial [Apis mellifera] (7e-84) |
GeneOntology terms    | GO:0005634 nucleus GO:0003723 RNA binding GO:0005730 nucleolus GO:0008150 biological_process GO:0000794 condensed nuclear chromosome |
InterPro families   | IPR005554 Nrap protein |
Orthology group | MCL14207 |
Nucleotide sequence:
ATGGTGTCGAGTACCGTTGATAGAGGTCCCTCCGCAGACCTGCCTGAGGCTGAGCAGTTC
AGAGATTTTTGGGGCGAGAAGTCCGAGCTCCGTCGTTTCCAGGACGGGTCTATAACAGAG
GCTTGTGTGTGGGACGGCCAGGGGACTGTTTCCAAGCAGATCGTGGACTACCTGATGAAG
GTCAAATATGACGTGTTTCCCGTGTTCCACTGGTCGCGCCTGCTGTCTTCTCTCGTGCCG
GCTTCATCTTCGTCAGCCGCCGTTCGTTCATCAGCCGCAGTTCTCCGGAGTCATCTCGCG
GACCTGGAACTGCCTTTGGACATCAGCTCTGTGCAAGGGGTGTCGGCCGTATTCAGCAGC
ACGGAGCCCGCCCCTCCAGAGAGACGTGGCGAGCGTAACCCGCGACGCCGCGGAGATTCG
TGTCTCATCAAGGACCAGGGAGACTTCAGACTGCCGCCTTACGTGCCCGCCAACAGGATG
GTCATAGAACTAAGTCACAGCGGCAAGTGGCCGGGGGACATCGAGGCGTTCCGCTGTCTG
AAAGCGGCGTTTCATTTGCAGATCGCTGAGAAGTTGAAGAGCCAGTTCAATCTGCCGACA
CACGCGCGCCCCGAGCACCTGGACGTGCTGCAAGATGGGCTGGTGTTCAGGCTGAGGATA
GCGCACGCTAAGGAGATCACCTTACTGAGGAGGGAGTTGGTGCGCGGAGTCGTCACGTTC
AGAGAAACAGACGAGAGCATACAGCTGTACTGTGATACTGTCATCATGCCGAAACTGAGA
GGCGCCTTGCACGGTCTAGACCGCAGATACTCGGCCTTCGCCCCCACGGCGTGTCTGTTC
AAGCGCTGGTTGTCGGCGCACCTGCTGCAGGTCCCGGGTGCGGTGGCCGAGCTGATGGTC
GCCCGCTTGTTCCTGGAGCCCGCGCCGCTCGTTCCCCCACGAGACTACGACACCGGACTA
TACAGGGTGCTGAACCTCCTCGTAGAACATGACTGGGGCAAGGATCCGCTGGTGGTGGAC
TTCAACGGAGACATGACCCGTGAGGAGTTGTCCGAGCTGGAGACTAAGTACCGCGAGATC
TCTCCCCGGCCGCACGTGTTCATCGTCACCCCGTTCGACGGCGAGTGTCCTGGAGCCTGC
AGCGGGGGACTTGCACCGGAAGTGACGTCACGAGCCGTCTCACTGGCGCGAGCAGCGCTG
GAGCACGTGGAGGAGTCGCTGCAGCTGATGAAAGACGGTTTATTGGGCCTCTTCATCCCC
TCCCTGGTGGGCTATGACGTCATCATCCACCTGGTCCCGTCCCTGGTGCCGCGGTACTCC
AGCCGCGTAGGCGCCGGCCGCCCACCGCCAGCTCACGATGACCCCGGCTCCGCAGAACTG
ATACCGGTGGTGGAGTTCAACCCGGTGGAGTTGTATTTGGAGGAACTGAGAAGCGCCTAC
GATGAGTTCGCTGTGTTCTTTAATGACCCGTACGGCGGTGACGTCATCGCTGTGCTCTGG
AGACCGTCTGTAGAAGACGGACGGCATCTGGAGGTACTGAACGCCAACGCACTGAGACCT
GCGGCCGGCGACGGAAAGACCCCTTATAGAGTCAACTTGGACGCTATCGTGGAAGACTTT
AAGATACTGGGCAGAGGACTCGTCAAGGAAGTTGTTGTTAATAAGAATTAA
Protein sequence:
MVSSTVDRGPSADLPEAEQFRDFWGEKSELRRFQDGSITEACVWDGQGTVSKQIVDYLMK
VKYDVFPVFHWSRLLSSLVPASSSSAAVRSSAAVLRSHLADLELPLDISSVQGVSAVFSS
TEPAPPERRGERNPRRRGDSCLIKDQGDFRLPPYVPANRMVIELSHSGKWPGDIEAFRCL
KAAFHLQIAEKLKSQFNLPTHARPEHLDVLQDGLVFRLRIAHAKEITLLRRELVRGVVTF
RETDESIQLYCDTVIMPKLRGALHGLDRRYSAFAPTACLFKRWLSAHLLQVPGAVAELMV
ARLFLEPAPLVPPRDYDTGLYRVLNLLVEHDWGKDPLVVDFNGDMTREELSELETKYREI
SPRPHVFIVTPFDGECPGACSGGLAPEVTSRAVSLARAALEHVEESLQLMKDGLLGLFIP
SLVGYDVIIHLVPSLVPRYSSRVGAGRPPPAHDDPGSAELIPVVEFNPVELYLEELRSAY
DEFAVFFNDPYGGDVIAVLWRPSVEDGRHLEVLNANALRPAAGDGKTPYRVNLDAIVEDF
KILGRGLVKEVVVNKN