| New model in OGS2.0 | DPOGS201067 |
|---|---|
| Genomic Position | scaffold1992:+ 62976-65001 |
| See gene structure | |
| CDS Length | 1929 |
| Paired RNAseq reads | 294 |
| Single RNAseq reads | 826 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007200 (3e-116) |
| Best Drosophila hit | vacuolar protein sorting 33B (4e-76) |
| Best Human hit | vacuolar protein sorting-associated protein 33B (8e-42) |
| Best NR hit (blastp) | vacuolar protein sorting (vps33) [Aedes aegypti] (7e-117) |
| Best NR hit (blastx) | vacuolar protein sorting (vps33) [Aedes aegypti] (5e-103) |
| GeneOntology terms | GO:0016192 vesicle-mediated transport GO:0006904 vesicle docking involved in exocytosis |
| InterPro families | IPR001619 Sec1-like protein |
| Orthology group | MCL16389 |
Nucleotide sequence:
ATGGATCAACCACTCTCTTTAAAGTTGGCTTCTTTGTGTCAAATATCCCAGTATAAATTG
GAGCACATCCTGTCCCAATGCGGGGAAAAAGCCGATTTAATCATTGATCCTGTTCTTATA
AAGCCACTGGAGAGAATATGTGGAGTGACTTGGCTCAGGCAACATGGTATAGATAAAATA
TATAAAATGGACCCACAACTTGGATCTACATCTAATACGAGAAGGATATACTTTATACCA
GCTTGTATCAAGAAATACAAATGTGTGTTGGATCAGATATCATCACTTCTCAGCCTAAAC
CCAGCTCAAGCCGATGCCAAGTGTTTTAATATTATTATAGTGCCTAAATTCGTATGTACT
TTCGATTCCATATTAGAGAATAAGGGTTTATATGAAATAGTCAAGCTACATTCATTCTCA
TGGGAATTGATGAGGTTGGATGATCAGCTCTTGAGCCTGGAGGTGCCTTTCCTTTATAAA
CAATTGTATGTGGAAAAAAATCAATCATTGTTGTCGAGTATTGCTATGTCTTTGTGGAGC
TTATTTCATGTTATCGGCAAACCTAAATGTTTGATGTCATTGGGAAAGATGTCATCAAGC
GTTTTAGACCTACTTGAAGTATATAACGAGACCTTCACTAGAGACTTTGTTAGTAACAAT
ACTGATGATATCGGAGCAGTTCTCGTTATAGATAGAGATCAGGATTATTCTTCCAGTCTA
CTAACACCGGCTACTTATAGTGGACTGTTAAGTGAAATTTTCAATATAAACTGTGGTCAT
CTAGAGCTTAATGTGAAAGAAACAAAGTTGAAGAAGGGCAAGCTTAATTTTACCACATCT
AAAGATGAAACAGCCAAAACCGCAGTCATGTCGTTAGACAGCTCTATTGATCATTTGTAC
GGTGAAATAAAGCATAGGCATTTCTCTGAAGTTTTAAGCGTGTTGAGTTCAAAGGCGAAG
CTTCTCAAGAACGAGGATATCAAGGCTCTCGGAATACAAGAAATGAAACAGTTTGTTGCG
ACTAAATTGCAACAAGTTACACTGTTCAAGCAGAATCTAGTGAATCACGTGTTGGCCAGC
GAGACGATAATATCAGAAATGAACAATAAATTTGAAAACTTAACATTAACGGAGAGTGAA
ATGCTCAATAATAGAAATAAAAGGGCCAATTTCACTTACATCGATGAACACTTTGGCACG
GATGTCCACATGCATAACTCCTTAAGACTAATGTGCTTGTTAAGTTTAACCCAAGGTCTG
ACCTACGAGGAGTACAATTCGCTTGTACACAAGTACCTATTAGCATTCGGCTACAAGTTT
TTATATGTTTTCAACAATTTGATAACATCCGGTTTACTCGTACAACCTTCCAGCCCAAAA
TTGTCTTTGTCCAATCTGAGCAATTTAAGCGACAGATTGCCTAAATGGCAGACTGAGTTC
CAAACGGTGGCCAACAAATTGAAACAATTGCCGACCAAGTCAGATAGTGCGAAGTCTCCG
AGCTACGTGTTCAACGGCGGCTACATACCTCTCGTAGCTGTTATATGTAACGCACTATTG
ACATCGGAATCCTTAGCTGAACTCCTGACGAAACTATCAGCGCTCGATGATCTAAAAATC
GGCGGCAGTTCAGTAGACAAAGCGAAACGAGGTATGGAGAGCTTAAACGAAAAAATAACG
AATTCAAACACGAAAACCGATTCGGAAAATGGCTACAGGGATGCTAAGACCCTGTTGAAG
ACGCTGAAGGGAGACAGCAGAACTATGTTTACTTTGAAGCCTAGAACAGTGCTGGTTTAT
ATGATCGGGGGGGTGACGTATGCGGAAGTAGCCGCCTGTGACGTCATTCAGTCCGTAACA
GGAAGCAGGATCATTATAGCCAGCGACTGTATAGCGAGCGGCAGCGACCTGATCGCCGCT
AATATGTAA
Protein sequence:
MDQPLSLKLASLCQISQYKLEHILSQCGEKADLIIDPVLIKPLERICGVTWLRQHGIDKI
YKMDPQLGSTSNTRRIYFIPACIKKYKCVLDQISSLLSLNPAQADAKCFNIIIVPKFVCT
FDSILENKGLYEIVKLHSFSWELMRLDDQLLSLEVPFLYKQLYVEKNQSLLSSIAMSLWS
LFHVIGKPKCLMSLGKMSSSVLDLLEVYNETFTRDFVSNNTDDIGAVLVIDRDQDYSSSL
LTPATYSGLLSEIFNINCGHLELNVKETKLKKGKLNFTTSKDETAKTAVMSLDSSIDHLY
GEIKHRHFSEVLSVLSSKAKLLKNEDIKALGIQEMKQFVATKLQQVTLFKQNLVNHVLAS
ETIISEMNNKFENLTLTESEMLNNRNKRANFTYIDEHFGTDVHMHNSLRLMCLLSLTQGL
TYEEYNSLVHKYLLAFGYKFLYVFNNLITSGLLVQPSSPKLSLSNLSNLSDRLPKWQTEF
QTVANKLKQLPTKSDSAKSPSYVFNGGYIPLVAVICNALLTSESLAELLTKLSALDDLKI
GGSSVDKAKRGMESLNEKITNSNTKTDSENGYRDAKTLLKTLKGDSRTMFTLKPRTVLVY
MIGGVTYAEVAACDVIQSVTGSRIIIASDCIASGSDLIAANM