Genomic Position | scaffold32532:+ 267-1570 |
---|---|
See gene structure | |
CDS Length | 1179 |
Paired RNAseq reads   | 614 |
Single RNAseq reads   | 1578 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005610 (4e-10) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (9e-149) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-138) |
GeneOntology terms   | ND |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCAGTCGCTCCGTTAAAACCACTCCTCGCCACTCTTAAGAATGACAATGACAAAGGA
CTGGGTACGGCTAGGGCATTGCCGTTAAACGACGCGCAGGCACATCGCCCTACACCTGCG
ATAAGTGGGCAAGGGCTACCGTGTCAAGTACGGGCACCGCTAAAGACGTCAGTATCCCAA
CGGAAACTCCGCTTTGCAATGGGGAATATTGGCTCTCTAACCGGACGATGCAGAGAACTT
GCAGGTGTACTCATGAGACGTCGGGTCCAGGTTGCATTCCTATATCTGCAGAAGGACTGC
GTGCCTCGTCAATGTATCTGGTGGGCATTGCGATCCAAAGGGATCTCTGAGGCCTATATT
GACATCAACAGAGACAAGTACCGCGATTCCGTTTCAATGGACCAGCCTCCATGGCTGATG
ATGTATGCCGATGACATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTG
AACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAG
TACATGGCTTGCGGAAGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGCCGTT
AAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTGCATGAGTCCGGAGGCATCGATCAC
GATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAATGGCGTGAGGACACAGGTGTGGTC
TGCGATCGCAGAATACCTACCAAGCTCAAGGGAATAATATACAAGAGCATAATCCGACCG
GTTCTCTTATATGGAAGCGAATGTTGGCCAACACTGTCCAGGCACACTCAGGAGCTTCAC
GTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGCGTAACGCGGGCTGACCGTATACGT
AACACATTTATCCGAGGTAGTCTTGGAGTCCGTGACGTAGCGGATAAGCTTCAAGAGAGT
CGCCTGAGATGGTATGGCCACGTTGCACGCCGGCCTGAGAATTACGTCGGAAAAATTTGC
CTTGATATGTCGGTCCCTGGAGCAAGACCCCCAGGACGCCCAAGAAAGCGATGGCTGGAC
ACCGTGAAGCAGGATATGAGAGCCAATGGACTTACCACCGCGGATGCTAAAGACCGTGCA
AAGTGGAGGAGTTTGAGCAGGAAGGCAGACCCTAGCTAA
Protein sequence:
MAVAPLKPLLATLKNDNDKGLGTARALPLNDAQAHRPTPAISGQGLPCQVRAPLKTSVSQ
RKLRFAMGNIGSLTGRCRELAGVLMRRRVQVAFLYLQKDCVPRQCIWWALRSKGISEAYI
DINRDKYRDSVSMDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTE
YMACGSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWREDTGVV
CDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRADRIR
NTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPGARPPGRPRKRWLD
TVKQDMRANGLTTADAKDRAKWRSLSRKADPS