| New model in OGS2.0 | DPOGS208832 |
|---|---|
| Genomic Position | scaffold209:+ 43940-58474 |
| See gene structure | |
| CDS Length | 4788 |
| Paired RNAseq reads | 3483 |
| Single RNAseq reads | 7940 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007937 (3e-108) |
| Best Drosophila hit | CG1657 (7e-49) |
| Best Human hit | GTPase-activating protein and VPS9 domain-containing protein 1 (3e-66) |
| Best NR hit (blastp) | PREDICTED: similar to GTPase activating protein and VPS9 domains 1 isoform 1 [Apis mellifera] (7e-169) |
| Best NR hit (blastx) | PREDICTED: similar to GTPase activating protein and VPS9 domains 1 isoform 1 [Apis mellifera] (2e-158) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005622 intracellular GO:0005829 cytosol GO:0005085 guanyl-nucleotide exchange factor activity GO:0006897 endocytosis GO:0007165 signal transduction GO:0032794 GTPase activating protein binding GO:0051223 regulation of protein transport GO:0016020 membrane GO:0051056 regulation of small GTPase mediated signal transduction GO:0005768 endosome |
| InterPro families | IPR013995 Vacuolar sorting protein 9, subgroup IPR008936 Rho GTPase activation protein IPR001936 Ras GTPase-activating protein IPR003123 Vacuolar sorting protein 9 |
| Orthology group | MCL16047 |
Nucleotide sequence:
ATGATGCAGCCAACATCAGAAAGCTGTATGAATATAGCAGAACTAGCAAACCAATTAAGG
AGAGAGAAAATCTTTATAAATTCCGAAAGGCAATTGATACAGAATCTCAATGAAGAGGTG
GAGAAAACTGTCTTGGAACTGTTGCAAGCTGCCTGGATATGTTCACAACAGCGGCAGAAT
CTAAACAACCTGATCAGCTCAAGGAGTGAGGCAGAGTCGGTAGCAGCTTGTCAGAAAGCA
AGTCTACTAGAAAACACCACTTTCATTGATGCACAAAAAGTTTTGAAATACAAAGAAGTA
CAAGCCTTAGGAGAGTTGCTAGGATGGCTTCGGAACACACCAAACCTCATGGCTCTGTGC
CTCATACTGGGGGAGGATCACATGCCATTGAGTCTTCCTTCGTCTTTGGCCGCCGGGCTG
TATGGGAGCTGTCGGTCTCCATCTGATCGAACACGCATGTTGGCCGTGCTGCGATCGCTT
ATCAAGTATCAAATGGCCCCATCTGCAGACCCGAGGAAGGTGATTCGTAGTAACAAGTCG
TCTCTGGCGCTGCTGTACTCCGTGTTCCGCGACAACCACGCCCCCACGCGGCAGTTCCTC
CGCACGGTGTTGCGCGCGCCCGTACTGGCCGTGCTCACTGAGGACGAGTTCTTCCTCGAC
GTAGACCCCGATAAGGCAATGGAGCGATTCACTCCCGCTGATCGTGCTAAGAAGTTTGGT
CAACCGAACACCACCGAATACAACACTAAGGTGGCCCGCTATCGAAAGTGGACGGTGCAG
TCGTTGTACAACCTCACCAACAAGTTCATCGCCTCCCTGAAGGAGAACTGGTCGACCTTC
CCCTCCTCCATAGCCTGGATTGTACAGCAGGTCGTGCATCTGCTCAAACAGAATTCCAGG
AGCACGGACCGCGACATCCACACTATATGCAGCGAGTTAGTCCTGGGTCAGCTGCTGTGT
CCGGCGGTGGTGAACCCGGAGTCCCACGGGGTCCTCTCCGCCCCCGTCTCGTACATCGCC
CGCTTCAACCTGCTGCAGATCGCTCAGATACTACAGATGCTCAGTCTGGCAAAGTACCAG
GAGGTGGAGCCGAAGGTCCGCGACCTGTATATGAAGTTCGAGCGGTCGTGTGTGTGGTCG
CTGGTGGACAGTGTGGGCGGCAGCGCCTTCGCCCCCACCACGCTGGTGCCTCCGCCAGAG
ACCCCACTGAGAACCGACGCTCCGCCCCCCGCCACGGTCGCGCTATACACGCCACAGGAC
GCACACCTACTGATAACATTCCTAAGAAAGATCTCGTCCAAACTAAACAACAACAACCAG
AACCCCAGCGAGGAGAGAGCTAACGGAGCTGCGGACAACGCTGTCGACTCTGGGTTTAGT
GAGCATGTTCGTGACCAGAGCAATGGTGGTGCGGGCTGCGGCCGCCTGGAGGCGCTGGTG
GCCAACAACGACCCCAACTACCGCTCCAGGCTGCACGACCTCTTACGAAAGATGCCAGAC
TTCGCCGCACTACGGCCTTCGCCGGTCGAGTGTCGCGAGTGGTCGGAAGGCGGACGGCGA
GGTCTGCTCGGACGACGGAGGAGAGAGGAGCTTCACAGGGACGAGCTCGAAGTACTCGTG
GTGAAGATACACGAGATGAACGAGAACGAATATGTCGGATTGATTCCGGAGTCCAAAGTC
TTAGAGAACTACTACGGCGAGACGGAGGGAGACGAGGCCGGGGCACTCGTCGCCGCCGCC
GCACCCGTACAGAAACGAACGAGATTCTCAGTGTCCCATGACGAGGTATCGTTGGGGAAC
ACTTCAGACAACCTGGAGGCCGTGTCTGAAGCGGCCTCCAACCACAGCGTCACCTCCAGC
CTGGAGCTCGAGACAGAGGATCAGAACGACAACCTGTCCGACATGGTGTCGGCGAACGTG
AGCGGTCGCGGCAGTCCTAACATATCTGGTCGAGAGACGCCTTCCTCGCAGGTGACGGAC
GGAGACCCGGCTGCCGACCAGGCCCTTAGACGCATCCCAGCCAACGCGCCCGCCAGCCAG
GCCGTGAGCGTCGCGCACGCCAAGATGCTGAAGCAGGCTCGGAACGACATAGAGGACAAG
TTCTGCAAGTTCGAGATCAAGAAGCTGCTGGAGGGAGACGAGACCATCAGCATCATGTCG
GACACGTGGAGCACGGACGTGCTCGCCTCCGACTCGGAGACCATCGGCGACTCGTGTGAC
ACCACACAGGCGGCGGCCGGACAGGGATCCAGCGCCAACACCATCGCCCCGGACGTGTCC
GAGACGGCCAGCGAGTCCGCCTGGAGCGTGGACGTCCTGGCCTCCGACAGCGACAGGAAC
ACTGAGGTCGACACTGATGACTGCGTGTCTGTGGCGGCTCGGTCCGACACCTCCTGGCCC
CGGCGAGCCTCGCACCACGACGACCTCACACGAAGACATCTAGCACAGAACGGTGTCATG
AAGCGGCCGGACCTCAACAGCCCCCGACACTCCTCAGCGGCACAGCTGCCTAACAGGAGC
GGGATATACCTGAGCGCGACCGCGGCGTTGTCCCGGGGCGGGGAGCTGGACCTGTCCGCG
CCCTACGACCACAGGAAGAGCATCCTCGTTAACGGATATCCGGTGATGACCTGTTACGCG
TCAGCCCCCGAGAGCCCCAGCACTGCGCCCCCTCTGACCAACGATGTGTTCGACTACCCT
CAAAACAACGGCGGGAGTTCCTCGTCCACGATAGAGGGCGGGCCAGCGGAGGCGCCCGAG
GCCGAGGTCTCCTCAGAGGCGGGCCGGTCCTCGTGCTCCACGGCGGGACCGATGGGGAGC
GGAGCACCCGGCTCGGACGCCACCAGCCAGTGGGTGGACGACAGCTTCCCCGACAAGTAT
CTGCCCTCAACGTGTAAAGGATACGAGGATAATGAAATGGACAGGTCATTGAACTCGAGC
GAGAGTTCATTTAACGCGATGTCAGCGTCTCAGTACGACAGGAGGTTCGAGCCGGGGCCG
GAGGCCGAGCGGGCCGAGCGACGGGAACCGGAACCGGAGCCCGGGCGCTCCTTGACGGAG
CTGGTGACGCGCATGAGCGCCGCCAGCGTCAGCTCCAACATCGCCAGTATAACGAGAGCC
GCCAAGACCGAGATCCGGACCAGCATCGTCAACATCAGCTCCTCGAGGATCGACAAGAAG
ACCAGTGACGTGTCGCTGAGCACGTTGTCCGTCAACAGCGAGAACTCCACGTCGGACCGC
AGCTCCAGCCAGGACGTGAACTCGGACAACGTAACCGAGCGCCGGGTCAGCCCGCCGCCC
AAGACCTCCACCGGCGCCATTCCCAAGAGCATCTCCTTCGATGCCACAGCTGAGAAATCT
CAACGTCGCCGCATGATCGGCGAGGAGGGTCTGGTGGGGAACCTGGACGAGCTCAAGAAC
AACGTGAAGCGCTCCGGGGGGAACCTGCTGCACAAGATTAAGATGTTCAGACACAAGGCC
CGGACACACCATGGAGATATGAAGGTGTCTACTGAAGAGGTTTCCGTGGAAGAGAGGAGC
GAGCGAGACGGGGAGAGCTCGGAGGAGATACTCGCCAAGTACAGGCGAGCGGCCGACAGC
GCTCCGAGACGACCACGACACGACAACAACACGCAGGCCGTCACGACACACGACCTGGAG
CGCTGTGAGGGCGCGGTGGACCTGAACGACCCCGAGGTGTTCAACAACATGAAGAGGCGG
CTGCGAATAGTGCTCTCCAACATAGACCTGCACTGCGTGGACTACGTACCGAACCGCTGT
ACGAGCGCGTCCCTGTCGGAGTGGTGTCGCGCGGGCAGCAGTGCGGAGTGCGCGGCCATG
AGCCGTGCTCTGCTGAGCGGGGCGGGCGGGGAGGAGGGCGCGGCGCGTATCGCTCGTCTC
GCGGCCTCGCTCCGGGCGGACCTCGCCTCACGCCGCCCGTACGCCGCCTACCTCGCCTCC
TGCCGCGCCTCGCTCGCGCACGCGCTATACATGCTGCAGACCGAGGTGAAGGCTATCCGC
CGTGAGTGTGAACGGTGGCTGCGGGCAGCGGCCGCGGCCAGGGTCCGGGAGCAGCTGGAG
CGAGGGTCTTCGCTGAGGCGGCTGGCGCATCACACCACACAACACGCACACGCTCTACTA
CACGGTGGGGAGTTGATCGACGAGAGAGCGATGCGGCTGACCGCCAGCATCAAGGCCATC
ACGGCCGAGATCAAAAGCGACCCGTCCTGGGAAGGCGCCTCCGGCGTCATGATGGAAGGT
CTGGAGCGCACCGTGGAGAGAGCCGTCTACACCAGGCTCTACCTGCACGTGATGTTCCCC
AACGGAGACGGAGACATCGCAAGGGATCAGGTGTTCAGCGAGCACATCCGCCGCGTGTTG
TCTGTGAGCGGCGGTGCCGGTGGTGTGGGCGTGGCAGCTCGTCACCTGTGGGCGGCGCCC
TTCCCCCACGCCCAGCAGCAGCTGCGAGCCCTGTCCGCTCACCGCACTCCGTCGGACAAG
CTGCGCTGCGTGCTGCGCTGCGTGCGCTCTCTGCTGGCCACCCTGGCGCTGTCCACGCCC
GACCCGCCCGCCGCCGACGACCTCACACCCGCCCTCGTATACGTCATACTCAAGGTGAAC
CCGCCGTCCCTGCTGTCGACCCTGGAGCTGGTGAACGCCCTGTCCGGTTCGTCACTTCAG
GGCGAGTCTCTGTACTGGTGGACTCAGTTCTGCGCCGCCGTCGCCTACATCAAGACCATG
GACTACCCGCAGACGACCGGCTCACACACACATGCGCACGACTCCTAG
Protein sequence:
MMQPTSESCMNIAELANQLRREKIFINSERQLIQNLNEEVEKTVLELLQAAWICSQQRQN
LNNLISSRSEAESVAACQKASLLENTTFIDAQKVLKYKEVQALGELLGWLRNTPNLMALC
LILGEDHMPLSLPSSLAAGLYGSCRSPSDRTRMLAVLRSLIKYQMAPSADPRKVIRSNKS
SLALLYSVFRDNHAPTRQFLRTVLRAPVLAVLTEDEFFLDVDPDKAMERFTPADRAKKFG
QPNTTEYNTKVARYRKWTVQSLYNLTNKFIASLKENWSTFPSSIAWIVQQVVHLLKQNSR
STDRDIHTICSELVLGQLLCPAVVNPESHGVLSAPVSYIARFNLLQIAQILQMLSLAKYQ
EVEPKVRDLYMKFERSCVWSLVDSVGGSAFAPTTLVPPPETPLRTDAPPPATVALYTPQD
AHLLITFLRKISSKLNNNNQNPSEERANGAADNAVDSGFSEHVRDQSNGGAGCGRLEALV
ANNDPNYRSRLHDLLRKMPDFAALRPSPVECREWSEGGRRGLLGRRRREELHRDELEVLV
VKIHEMNENEYVGLIPESKVLENYYGETEGDEAGALVAAAAPVQKRTRFSVSHDEVSLGN
TSDNLEAVSEAASNHSVTSSLELETEDQNDNLSDMVSANVSGRGSPNISGRETPSSQVTD
GDPAADQALRRIPANAPASQAVSVAHAKMLKQARNDIEDKFCKFEIKKLLEGDETISIMS
DTWSTDVLASDSETIGDSCDTTQAAAGQGSSANTIAPDVSETASESAWSVDVLASDSDRN
TEVDTDDCVSVAARSDTSWPRRASHHDDLTRRHLAQNGVMKRPDLNSPRHSSAAQLPNRS
GIYLSATAALSRGGELDLSAPYDHRKSILVNGYPVMTCYASAPESPSTAPPLTNDVFDYP
QNNGGSSSSTIEGGPAEAPEAEVSSEAGRSSCSTAGPMGSGAPGSDATSQWVDDSFPDKY
LPSTCKGYEDNEMDRSLNSSESSFNAMSASQYDRRFEPGPEAERAERREPEPEPGRSLTE
LVTRMSAASVSSNIASITRAAKTEIRTSIVNISSSRIDKKTSDVSLSTLSVNSENSTSDR
SSSQDVNSDNVTERRVSPPPKTSTGAIPKSISFDATAEKSQRRRMIGEEGLVGNLDELKN
NVKRSGGNLLHKIKMFRHKARTHHGDMKVSTEEVSVEERSERDGESSEEILAKYRRAADS
APRRPRHDNNTQAVTTHDLERCEGAVDLNDPEVFNNMKRRLRIVLSNIDLHCVDYVPNRC
TSASLSEWCRAGSSAECAAMSRALLSGAGGEEGAARIARLAASLRADLASRRPYAAYLAS
CRASLAHALYMLQTEVKAIRRECERWLRAAAAARVREQLERGSSLRRLAHHTTQHAHALL
HGGELIDERAMRLTASIKAITAEIKSDPSWEGASGVMMEGLERTVERAVYTRLYLHVMFP
NGDGDIARDQVFSEHIRRVLSVSGGAGGVGVAARHLWAAPFPHAQQQLRALSAHRTPSDK
LRCVLRCVRSLLATLALSTPDPPAADDLTPALVYVILKVNPPSLLSTLELVNALSGSSLQ
GESLYWWTQFCAAVAYIKTMDYPQTTGSHTHAHDS