| New model in OGS2.0 | DPOGS208833 |
|---|---|
| Genomic Position | scaffold209:+ 63134-63508 |
| See gene structure | |
| CDS Length | 375 |
| Paired RNAseq reads | 218 |
| Single RNAseq reads | 845 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007940 (8e-65) |
| Best Drosophila hit | RNA polymerase II 15kD subunit (2e-53) |
| Best Human hit | DNA-directed RNA polymerase II subunit RPB9 (1e-42) |
| Best NR hit (blastp) | GF16163 [Drosophila ananassae] (2e-55) |
| Best NR hit (blastx) | PREDICTED: similar to RNA polymerase II 15kD subunit CG3284-PA [Apis mellifera] (3e-58) |
| GeneOntology terms | GO:0006366 transcription from RNA polymerase II promoter GO:0005665 DNA-directed RNA polymerase II, core complex GO:0003899 DNA-directed RNA polymerase activity GO:0030528 transcription regulator activity GO:0045449 regulation of transcription GO:0008270 zinc ion binding GO:0003677 DNA binding |
| InterPro families | IPR001529 DNA-directed RNA polymerase, M/15kDa subunit IPR001222 Zinc finger, TFIIS-type IPR019761 DNA-directed RNA polymerase M, 15kDa subunit, conserved site |
| Orthology group | MCL13910 |
Nucleotide sequence:
ATGAATATCGGTCGAAAAGACGGTGGACCGGGTTATGTTGGTATACAATTTTGTCAAGAA
TGCAATAACATGCTTTACCCACGAGAAGATAAAAACAACAAAGTCCTGCAGTACGCTTGT
CGAAATTGCGATTATAAACAACTGGCAGACTCAAATTGTGTGTATGTCAACAAAATTATG
CACGAAGTAGATGAACTAACACATATAAATCCCGATGTAGTAAGCGATCCGACATTACCC
CGCACAAAAGATCATGTCTGCCCGAAATGTAATCACAGGGAAGCTGTATTCTTCCAAGGA
CAAACGAGACGTGCAGAAGAAGAAATGAGGCTGTATTATGTGTGCACCAGCTGCAAACAC
AGGTGGACGGAGTGA
Protein sequence:
MNIGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLQYACRNCDYKQLADSNCVYVNKIM
HEVDELTHINPDVVSDPTLPRTKDHVCPKCNHREAVFFQGQTRRAEEEMRLYYVCTSCKH
RWTE