| New model in OGS2.0 | DPOGS208839 |
|---|---|
| Genomic Position | scaffold209:+ 123966-125877 |
| See gene structure | |
| CDS Length | 1014 |
| Paired RNAseq reads | 651 |
| Single RNAseq reads | 1914 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007945 (3e-82) |
| Best Drosophila hit | CG1622 (5e-62) |
| Best Human hit | pre-mRNA-splicing factor 38B (6e-56) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein LOC100170167 [Xenopus (Silurana) tropicalis] (4e-91) |
| Best NR hit (blastx) | PRP38 pre-mRNA processing factor 38 domain containing B [Culex quinquefasciatus] (3e-68) |
| GeneOntology terms | GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR005037 PRP38 |
| Orthology group | MCL13891 |
Nucleotide sequence:
ATGAGTGAAATTGAAGATTACAATCAACAGAAACCAGGAAAAACAAGCAAGCAGCATAAC
ATATTACCAATATGGGGTAATGAGCAGACTATGAATCTGAATCCTTTAATATTAGCGAAT
ATTCAAGGTTCTAGCTACTTCAAAGTGCATCTGTTCAAGTTGAAAACATATCACGAGGTT
GTTGACGAGATCTACTACCAGGTGAAACACCTCGAGCCTTGGGAGCGTGGAAGCCGGAAG
ACTGCCGGCCAGACGGGCATGTGTGGCGGCGTCAGAGGGGTAGGTGCAGGGGGCATTGTT
TCTACAGCTTTCTGTCTTCTCTACAAGTTATATACACTGCGGCTAACTCGCAAGCAAGTC
AATGGTCTTCTGCAGCACACAGATTCGCCATACATTAGAGCACTTGGTTTTATGTACATA
CGCTACACACAGCCTCCAGCTGACTTGTTTGACTGGTATGTCGACTACCTGGACGATGAA
GAGGAGGTTGACCCCCGTGCTGGAGGTGGGGGCTCTACTACCATAGGCGCTCTTGTGAGA
CAAATGCTTATCAAGTTGGACTGGTTCAGCACCCTGTTCCCCAGGATACCTGTACCCATC
CAAAAGCAGATAGAACAGAAGTTAGCAGAGCATAATAGACAGAGCAATGCCAGCAAGCCC
AGCAACTACCGGGGCGCTATAGGCAACGGTAATAATAGTAGTGCTAGTAGCGCCGGTAAC
TACAACACGGGCCGCACGGAGTCAGACCGCCGCGAGCACGACGACAGGGACAGACGTGAT
TATGGAGATGCTGAGAAATATTCAAAAGATAGACCAGTGAGACGCGACGACAGGGATCGG
GAGCGTGAGAGAGACAGGGATCGTGAACGAGATCGCGATCGTGATAAGGAGAGGCGGGAT
CGTGATCGGGTTCGTGAACGTCACCGTGACCGATCACGTTCACGAGACCGTCGTGATCGG
TCCCGCGAGCGACCACGTCACAGGTCACGCTCGAGAGATCGCCGCCACAGATAA
Protein sequence:
MSEIEDYNQQKPGKTSKQHNILPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEV
VDEIYYQVKHLEPWERGSRKTAGQTGMCGGVRGVGAGGIVSTAFCLLYKLYTLRLTRKQV
NGLLQHTDSPYIRALGFMYIRYTQPPADLFDWYVDYLDDEEEVDPRAGGGGSTTIGALVR
QMLIKLDWFSTLFPRIPVPIQKQIEQKLAEHNRQSNASKPSNYRGAIGNGNNSSASSAGN
YNTGRTESDRREHDDRDRRDYGDAEKYSKDRPVRRDDRDRERERDRDRERDRDRDKERRD
RDRVRERHRDRSRSRDRRDRSRERPRHRSRSRDRRHR