New model in OGS2.0 | DPOGS201927  |
---|---|
Genomic Position | scaffold201:- 44140-55690 |
See gene structure | |
CDS Length | 276 |
Paired RNAseq reads   | 11 |
Single RNAseq reads   | 618 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011982 (1e-05) |
Best Drosophila hit   | LpR2, isoform D (3e-10) |
Best Human hit | low-density lipoprotein receptor-related protein 2 precursor (7e-08) |
Best NR hit (blastp)   | lipophorin receptor [Galleria mellonella] (1e-24) |
Best NR hit (blastx)   | lipophorin receptor [Galleria mellonella] (5e-27) |
GeneOntology terms    | GO:0005041 low-density lipoprotein receptor activity GO:0005509 calcium ion binding GO:0016020 membrane |
InterPro families   | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat |
Orthology group | MCL24232 |
Nucleotide sequence:
ATGTTCGTTTTGGTGGGCTGTCAACGGGCAGCCCCCAAATATTGTGCCATTATGTGGTGG
TATATATTTTTCTGTGTAGTTTTTACTAAAACAATTGAAGTGCTTGGTACAAATGCAACC
GGATCAATCCAAGTCGGCAATGTATGTTCCCAAAAGCAGTTCCAGTGTGCGAACGGGAAG
TGTATACCAATAGCTTGGGTGTGCGAGGGAGACGACGACTGCGGCGACAAATCAGATGAA
AATATAGAAGAATGTAAGAAAGGTAAGGTAGAATAA
Protein sequence:
MFVLVGCQRAAPKYCAIMWWYIFFCVVFTKTIEVLGTNATGSIQVGNVCSQKQFQCANGK
CIPIAWVCEGDDDCGDKSDENIEECKKGKVE