New model in OGS2.0 | DPOGS210794  |
---|---|
Genomic Position | scaffold488:- 8979-12638 |
See gene structure | |
CDS Length | 681 |
Paired RNAseq reads   | 834 |
Single RNAseq reads   | 2464 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007109 (3e-101) |
Best Drosophila hit   | synaptogyrin (2e-49) |
Best Human hit | synaptogyrin-1 isoform 1a (3e-40) |
Best NR hit (blastp)   | PREDICTED: similar to synaptogyrin, putative [Nasonia vitripennis] (2e-75) |
Best NR hit (blastx)   | PREDICTED: similar to synaptogyrin, putative [Nasonia vitripennis] (2e-78) |
GeneOntology terms    | GO:0017158 regulation of calcium ion-dependent exocytosis GO:0016079 synaptic vesicle exocytosis GO:0016020 membrane |
InterPro families    | IPR008253 Marvel IPR021128 MARVEL-like domain |
Orthology group | MCL11029 |
Nucleotide sequence:
ATGGAGTCAGCTGGTGCTTATGGTGGTGGCAAAGCTGGTGGAGCCTTCGATCCTCAGGCT
TTTGTTCAAAAGCCTCCGGTTATTGTTCGCTCCGTTTGTTGGCTGTTCAGTGTGATTGTA
ATGGGCTGTATATCTGCCAAGGGCTGGTACATCAGCAAAACAGACGGCAAAGAGTACTGT
GTCTACAACGATGATACAAATGCTTGCAATTATGGAGTCGGAATCTCAGTCATAGCATTT
GTTGCATCTATAGCTTTCATTGTGGGGGAGTACTTGTTTGAACAAATGTCCTCCGTGAAG
ACAAGAAAACATTATGTTCTTGCTGATATGGGATTTTCTGCGTTCTGGGCGTTTTTATAT
TTCGTGGGCTTCTGTTATTTGTCCAACGCCTGGGGTAAGACTGAGAACCCGCCGATGGGT
ACAGCCAACAATATGCAGGGAGCCATCGCGTTCTGTTTCTTCTCGATTTTTGCTTGGGTA
GCGTGTGCGTTCTTCGCATTCCAACGCTTCCGTATGGGCGCTGACGCGGCCTTCGCTCCC
GCATACGAAGTTGAAGGCGCTGGCAGCCCGGGTACCTTCCCCGCCTACCCCGGCGCTCCG
GACCCACAGCCGGCGTACAGCGACCCACCCTTCCAACAACAACACACTGGTAACATGGAC
TACACCGCCCCTACATACTGA
Protein sequence:
MESAGAYGGGKAGGAFDPQAFVQKPPVIVRSVCWLFSVIVMGCISAKGWYISKTDGKEYC
VYNDDTNACNYGVGISVIAFVASIAFIVGEYLFEQMSSVKTRKHYVLADMGFSAFWAFLY
FVGFCYLSNAWGKTENPPMGTANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAP
AYEVEGAGSPGTFPAYPGAPDPQPAYSDPPFQQQHTGNMDYTAPTY