New model in OGS2.0 | DPOGS210873  |
---|---|
Genomic Position | scaffold488:+ 157537-158920 |
See gene structure | |
CDS Length | 654 |
Paired RNAseq reads   | 355 |
Single RNAseq reads   | 1073 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006998 (4e-69) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to predicted protein [Acyrthosiphon pisum] (3e-36) |
Best NR hit (blastx)   | PREDICTED: similar to predicted protein [Acyrthosiphon pisum] (1e-30) |
GeneOntology terms    | GO:0003677 DNA binding GO:0005634 nucleus |
InterPro families    | IPR000910 High mobility group, HMG1/HMG2 IPR009071 High mobility group, superfamily |
Orthology group | MCL15424 |
Nucleotide sequence:
ATGACAGTCCAACAACTGAACTCGAATATTTCTGACGACTCAGATGATATGGTTAGTTTA
CCATCGGAAGAAGAAATTTATAGACGAAAATATCAGTTGTTGCTGGAGCGATGTGAAGTG
TTGCAGCAGGATAATGAACGAATTGTGAATAGGATACATGAAGTCAAGAAAATAACCAAA
CGATATAAAAAAGATATAAAATTGTTAGTCGAAAGACTAGATAAACATGGAGACCCCTTT
AGAACGGCTTCAGTAGAAGTCGAGGTAAAACCAAAAGTTCCGGTACGACCTCCTCGTGTC
GGTGCCAAGACACAGACCCAATCAAAACAGGTTGACAAACAAAATGCCAGTGGAGGAAAA
AAACCAGCACCAAAAAGGAAAAGTAAAGCAGATAAGCCTGAAAGAGATCCAAACGCACCG
AAGAAGCCATGCAATGCATTTTTCCAGTTTTGTCAGGAACAAAGGCCTGTAGTTGTTGCG
GAAACTGCCACAGATGTAGGATCAGAGCCAACCAAACAAGAAATTACAAGACAACTTGCA
TCAAGGTGGAGGGCATTGACTAGTGACGAAAAACGGGTATATGTTGCAATGTTTGAAAGA
TCAAAGGAGAAGTATGCAGAAGAAATGTCAGCATACATCAAGAAAGAGCAGTAG
Protein sequence:
MTVQQLNSNISDDSDDMVSLPSEEEIYRRKYQLLLERCEVLQQDNERIVNRIHEVKKITK
RYKKDIKLLVERLDKHGDPFRTASVEVEVKPKVPVRPPRVGAKTQTQSKQVDKQNASGGK
KPAPKRKSKADKPERDPNAPKKPCNAFFQFCQEQRPVVVAETATDVGSEPTKQEITRQLA
SRWRALTSDEKRVYVAMFERSKEKYAEEMSAYIKKEQ