| New model in OGS2.0 | DPOGS209150 |
|---|---|
| Genomic Position | scaffold683:+ 3917-5888 |
| See gene structure | |
| CDS Length | 534 |
| Paired RNAseq reads | 26987 |
| Single RNAseq reads | 60567 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011467 (3e-93) |
| Best Drosophila hit | ribosomal protein L18A (6e-72) |
| Best Human hit | 60S ribosomal protein L18a (3e-61) |
| Best NR hit (blastp) | ribosomal protein L18A [Bombyx mori] (2e-94) |
| Best NR hit (blastx) | ribosomal protein L18A [Bombyx mori] (3e-94) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0022625 cytosolic large ribosomal subunit GO:0005840 ribosome GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR021138 Ribosomal protein L18a IPR023573 Ribosomal protein L18a/LX |
| Orthology group | MCL12529 |
Nucleotide sequence:
ATGAAGGCGAAAGGAGAGTTGAAGGAATATGAAGTCATTGGGCGCAAGCTGCCCTCGGAG
AGCGATCCCAAGCCTCCTCTATATAAAATGAGAATCTTCTCTCCAGACCCCATAGTGGCT
AAGTCACGGTTTTGGTACTTTTTAAGACAATTGAAGAAGTTTAAGAAGACTACCGGCGAA
ATTGTATCGATCAGGGAAATCCCGGAGAGGAGTCCAATCAAGATAAAGAACTTTGGCATT
TGGTTGCGCTATGAGTCTCGCTCGGGTGTCCACAACATGTACCGCGAGTATCGTGCTCTC
AGTGTGGGAGACGGCGTCACACAGTGCTACAGGGACATGGGCGCTAGACACAGGGCGCGC
GCTCATTCCATACAGATAATCAAAGTGGAGGTGATCAAGGCCGCTGCCTGCCGCCGTCCC
CAGGTGAAACAGTTCCACAACAGCAGCATCCGTTTCCCGCTGCCCAAGCGCGTGCATCAC
TACAAGAGACTCAACACCTTCGCATACAAGCGACCCAGCACATACTTCTTGTAA
Protein sequence:
MKAKGELKEYEVIGRKLPSESDPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE
IVSIREIPERSPIKIKNFGIWLRYESRSGVHNMYREYRALSVGDGVTQCYRDMGARHRAR
AHSIQIIKVEVIKAAACRRPQVKQFHNSSIRFPLPKRVHHYKRLNTFAYKRPSTYFL