| New model in OGS2.0 | DPOGS213344 |
|---|---|
| Genomic Position | scaffold212:+ 24200-43135 |
| See gene structure | |
| CDS Length | 2115 |
| Paired RNAseq reads | 1713 |
| Single RNAseq reads | 4160 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009151 (0.0) |
| Best Drosophila hit | rhophilin, isoform A (4e-162) |
| Best Human hit | rhophilin-2 (7e-110) |
| Best NR hit (blastp) | PREDICTED: similar to rhophilin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to rhophilin [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0017049 GTP-Rho binding GO:0005622 intracellular GO:0007165 signal transduction |
| InterPro families | IPR011072 HR1 rho-binding repeat IPR001478 PDZ/DHR/GLGF IPR004328 BRO1 domain IPR000861 HR1 repeat, rho-binding |
| Orthology group | MCL11885 |
Nucleotide sequence:
ATGGGTGATCAGGGAGTGTACAAGACGTGCGTCAACATCAACGAGGATGAGGGGGAGGAT
GAAGTGGACCTGGCGCTCACCAGGAAGAATCCTTTCGTGAGGGGCTCCGACCCCCGCGTG
GCGACCTGCCGCGGCCGTCTCCAGACCCGCAGGTGTCAACTCAACCAGGAGATCAACAAG
GAACTGCGGCTGAGGGCGGGCGCGGAGAACCTGTTCAAGGCTACCACCAACAGGAAGCTG
AGGGAGACGGTGGCCTTGGAGCTGAGCTTCGTCAACTCCAACCTCCAGCTGCTGAAGGAA
CAGCTGGCCGAGCTCAACTCCTCGGTGGAGCTGTACCAGAACGACAGCAAAGAATGTGTG
ATGCCCATGATCCCGCTGGGCCTGAAGGAGACCAAGGAGGTGGACTTCCGCGAGCCCTTC
AAGGACTTCATCCTGGAGCACTACAGCGAGGACGCCGCGGCCTACGACGACGCCATCTCC
GACTTCATGGACATGAGACAGGCCACGCGCACGCCGGTGAGGTCTTCAGCTGGCGTGGCG
CTGCTGTTCAAGTACTACAACCAGCTGTACTACATCGAGCGCCGCTTCTTCCCGCCGGAC
AGGTCGCTCGGGGTCTACTTCGAGTGGTTCGACTCCTTGACCGGCGTTCCGTCGTGCCAG
AGGACGGTCGCCTTCGAGAAAGCCTGCGTGTTGTTCAACATAGCCGGCATCTACACGCAG
ATAGGAGCCAAACAGGAGCGCTTCACGTGCTCGGGCCTGGACGGGTCCGTGGACGCGCTG
CTGCGGGCGGCCGGCGCGCTCCGCTACATACACGAGAACTTCACCAACGCTCCCTCCGTG
GACCTCGCCGCCGACACGCTGCTGGTGCTGGGCGCGCTCATGACGGCGCAGGCCCGCGAG
TGTCTGTTCGAGAAGCTGCAGCTGCAGGCCAGCGAGTGTCGCGACCAGCTCGGAGACCAG
CTTAGCTTGGACCTGGCGCAGGAGGCCGCACGCCTGGCAGACACCTACCGACAGCTGTAC
GAGAAGATGCAGACGGAGGGAGTCATCAACTACGTGCCGTACTCCTGGGTGTCGCTGGTG
CACGTCAAGGCGGAGTTCTATAGAGCGGTGTCTCACGAGTACTGCGCCGCGGGGCTCCTG
GCACCCGAGGGGCCGCCCGGCGACAGACTGCGGGACCTCTACCAGCCGGACGGACACGGC
GAGCAGGCCTCGTGCGAGAGCTCTCTGCCGGCGCTGGGTCGGGCTCACCTCGCGGAGGCC
CTCGCGGCCTACGAGGAGGCGCTCAGGCTGCAGAGGATGTGTAGGGAGCTCCGGAACAAG
CAGTCTCTGTCCCGCCTGATGAGCGTGAGTCGGGAGCGAGCCGCGGGGCTGGTGGCGCCA
CCCGCTGACGACTTCGACGACCTCATCGACGCTCCGCACATAGCCCCATCGTCCAAGTTC
CAGCTGGCGCTGACTCCGCCCGACTTCTCCCAGCACCGGGTGGAGGACCTGTTCCGGTCC
CTGGGACCCATCGCCGTGTTCTCCGCCAAGCGCCACTGGAGCGCCCCGCGTCTAGTGACG
CTCCACCGGCACGCGGGCGGGCCTCGCAGGAGGGACGGCGCGGGCGACGACGACTACGTC
ACCAAACAGAACGGAGTCTACATCAGCAGCTTCGACGGAGAATACCACCGCAGCCGGGCC
CGGGAGGCCGGGAGAGCGCCGGCGGACGGGGAGGGGTTCGGCTTCACCGTCCGCGGAGAC
GCGCCCGTCATGGTGGCCGCCGTGGAGCAGGACTCGCTGGCTGATATGGCGGGCATGCGG
CCAGGAGACTTCATAATGAGCGTCGGCGACAGGGACGTGAAGTGGAGCTCGCACGAGGAG
GTGGTGCGGCTGACGAGGGCGGCCGGCGACAGACTCACCCTCAGGCTCGCCTCGCCCATG
GACCAGGGAGCCAAGTCGTCCCCTAACGGAGGCCGTCAGTCCCGCTCCAACCAGGGCTCC
GTGTCCGCGGCCTCCACGTCCTCGGGGTCCACGGCGGCCGCGCGCCCCAGACGAGCTCCC
TCCTGGAACCCCTTCAAGAAGAACGGTGCGAGGGACAACAGCCAGCACAGACACGCCAAC
CTCGTCTACCGATGA
Protein sequence:
MGDQGVYKTCVNINEDEGEDEVDLALTRKNPFVRGSDPRVATCRGRLQTRRCQLNQEINK
ELRLRAGAENLFKATTNRKLRETVALELSFVNSNLQLLKEQLAELNSSVELYQNDSKECV
MPMIPLGLKETKEVDFREPFKDFILEHYSEDAAAYDDAISDFMDMRQATRTPVRSSAGVA
LLFKYYNQLYYIERRFFPPDRSLGVYFEWFDSLTGVPSCQRTVAFEKACVLFNIAGIYTQ
IGAKQERFTCSGLDGSVDALLRAAGALRYIHENFTNAPSVDLAADTLLVLGALMTAQARE
CLFEKLQLQASECRDQLGDQLSLDLAQEAARLADTYRQLYEKMQTEGVINYVPYSWVSLV
HVKAEFYRAVSHEYCAAGLLAPEGPPGDRLRDLYQPDGHGEQASCESSLPALGRAHLAEA
LAAYEEALRLQRMCRELRNKQSLSRLMSVSRERAAGLVAPPADDFDDLIDAPHIAPSSKF
QLALTPPDFSQHRVEDLFRSLGPIAVFSAKRHWSAPRLVTLHRHAGGPRRRDGAGDDDYV
TKQNGVYISSFDGEYHRSRAREAGRAPADGEGFGFTVRGDAPVMVAAVEQDSLADMAGMR
PGDFIMSVGDRDVKWSSHEEVVRLTRAAGDRLTLRLASPMDQGAKSSPNGGRQSRSNQGS
VSAASTSSGSTAAARPRRAPSWNPFKKNGARDNSQHRHANLVYR