| New model in OGS2.0 | DPOGS211303 |
|---|---|
| Genomic Position | scaffold122:- 99434-100984 |
| See gene structure | |
| CDS Length | 1551 |
| Paired RNAseq reads | 201 |
| Single RNAseq reads | 566 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007349 (0.0) |
| Best Drosophila hit | heat shock protein 60, isoform B (0.0) |
| Best Human hit | 60 kDa heat shock protein, mitochondrial (9e-174) |
| Best NR hit (blastp) | RecName: Full=63 kDa chaperonin, mitochondrial; AltName: Full=p63; Flags: Precursor (0.0) |
| Best NR hit (blastx) | RecName: Full=63 kDa chaperonin, mitochondrial; AltName: Full=p63; Flags: Precursor (0.0) |
| GeneOntology terms | GO:0009408 response to heat GO:0005739 mitochondrion GO:0051082 unfolded protein binding GO:0006457 protein folding GO:0005759 mitochondrial matrix GO:0006950 response to stress GO:0042026 protein refolding GO:0006458 'de novo' protein folding GO:0006626 protein targeting to mitochondrion GO:0005524 ATP binding GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR002423 Chaperonin Cpn60/TCP-1 IPR001844 Chaperonin Cpn60 |
| Orthology group | MCL10670 |
Nucleotide sequence:
ATGGGACCTAAAGGACGGAACGTTATATTAGAACAAACATTTGGACCACCTAAAATCACA
AAAGATGGTGTAACCGTTGCAAAAGGGATTGAACTAAAAGATAAGTTCCAAAATATTGGC
GCAAAGCTTGTGCAAAATGTTGCACATAAAACTAACGAAGAAGCCGGCGATGGAACTACA
ACAGCTACTGTTCTAGCAAGAGCAATAGCGAGAGAAGGGTTTGAATGCATCTCAAAGGGG
GCAAATCCAATAGAAATTCGAAAAGGTGTGATGTTGGCTGTGGAAACAGTTACAGAACAT
TTGAAAAAGATGTCGAAACCTGTTAAAACCTCTGATGAAATAGAACAAGTCGCAACTATT
TCAGCCAATGGTGACAGAAGTATAGGGAAACTCATAGCGGCCGCCATGAATAGGGTTGGA
AAAGACGGTGTCATAACTGTCAAAGATGGTAAAACCCTCGATGATGAATTAGAAATAATA
GATGGAATGAAACTAGAGAAGGGTTATATATCGCCATATTTTATTAATTCTAGTAAAGGT
CCAAAGGTTGAATATAATGACGCGTTGATACTTTTTTCGGATAAAAAAATTTTCAATGCC
AATCAAATTGTGCCCGCCTTGGAAATAGCTAATGCTCAAAAAAAACCATTGATAATTATT
GCAGAAGATTTTGAGGGCGAACCTCTATCAGTATTAGTAGTAAATAAGTTAAAAATTGGT
TTACAAGTAGCTGCTGTGAAAGCACCCGGTTTTGGTGAATATAGAAAAAATACTCTCATT
GATTTAGCTATTGCGACTGGTGGTGTAATATTTGAAGATAATGAGAATTTAATTCGTCTT
GAAGATTGTCAGCTTGAAAGTCTTGGTCAAGTCGGTGAAGTTTTAATAACAAAAGACACT
ACACTGTTAATCAAAGGAAAAGGCGATAAAGCTGAAATAGAACAGCGCATTGAACAGATT
AGAGCTGAATACGAAGAAACTTCTAGCGAGTTTGAGAAGCAAAGGTTATTAGATCGCATT
TCTAGACTTAAATGTGGTGTGGCTATATTACGTATTGGAGGATGTAGTGAAGTAGAAGTT
AATGAAAAGAAAGACCGTGTCAACGATGCCCTTAATGCTACAAGAGCTGCTGTTTCGGAG
GGAATTGTTCCTGGTGGGGGAGCAGCCCTCGTTAGATGTATACCTATTTTAAATAAACTA
AAACCTGCCAATCCAGACCAGGCAGTTGGAATAGATATAGTCAAGAAAGCTTTACGTACT
CCATGCTTAACGATCGCAAGTAACGCTGGTTATGATGGTTCGGTTGTGGTTTCGAAAGTT
GAGAGCATGGACAAAGATTTTGGTTACGACGCTCTCAACAATGAATACGTTAATATGATA
GAAAAGGGCATTATAGATCCTACGAAGGTGGTTAGAAGAGCACTCACTGATGCCAGTGGC
GTTGCATCACTTTTGACTACAGCAGAGGCTGTTATTTGTGAACAGAGAATGGATAAAAGC
TTATCACCTCCAACACTAGGTCCCGATACACAAGGAGTAACTATCTATTAA
Protein sequence:
MGPKGRNVILEQTFGPPKITKDGVTVAKGIELKDKFQNIGAKLVQNVAHKTNEEAGDGTT
TATVLARAIAREGFECISKGANPIEIRKGVMLAVETVTEHLKKMSKPVKTSDEIEQVATI
SANGDRSIGKLIAAAMNRVGKDGVITVKDGKTLDDELEIIDGMKLEKGYISPYFINSSKG
PKVEYNDALILFSDKKIFNANQIVPALEIANAQKKPLIIIAEDFEGEPLSVLVVNKLKIG
LQVAAVKAPGFGEYRKNTLIDLAIATGGVIFEDNENLIRLEDCQLESLGQVGEVLITKDT
TLLIKGKGDKAEIEQRIEQIRAEYEETSSEFEKQRLLDRISRLKCGVAILRIGGCSEVEV
NEKKDRVNDALNATRAAVSEGIVPGGGAALVRCIPILNKLKPANPDQAVGIDIVKKALRT
PCLTIASNAGYDGSVVVSKVESMDKDFGYDALNNEYVNMIEKGIIDPTKVVRRALTDASG
VASLLTTAEAVICEQRMDKSLSPPTLGPDTQGVTIY