| New model in OGS2.0 | DPOGS211326 |
|---|---|
| Genomic Position | scaffold122:+ 16415-23844 |
| See gene structure | |
| CDS Length | 1494 |
| Paired RNAseq reads | 14 |
| Single RNAseq reads | 37 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000521 (1e-07) |
| Best Drosophila hit | CG1832, isoform A (6e-32) |
| Best Human hit | zinc finger and SCAN domain-containing protein 12 (2e-43) |
| Best NR hit (blastp) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (2e-45) |
| Best NR hit (blastx) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (5e-51) |
| GeneOntology terms | GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0046872 metal ion binding GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGATGTTCGACCCACCTGATTTCCCGTATAAAGAATTAACAGACACCCTAGGAAAATCT
TTTAATGTTGAGACTGTCTCGACTTTGAATGTAGCACAGACTAGAGACGAACAAAACTTA
GAGCTTTATGTTGTGCAATCAGAAAATTTGTTCAACTACGAGCCTACGTTATTAGATGAT
AATACGGTCAATCAATTTCTGCTGCCGATTCAGGAATCTTCGGATACTGCTAATAAGGAG
CCAGAAGCCGGCCCGGACCTCCTGGCTCTCCATTCGTGTGTTATTTGCCATGAGATCTTC
ACGACGGATGCTGAGTTACTGGACCACACAGTTCTCGTGCACGCAACCGTTCCTACATCA
GATCAGGAACCGAGCACCTCAACAAGTGTAGAACATATTGATACACAAGAATCTAGCTTC
GAGTGTGAATGGTTGGTGTGCGGTGTGTGCGAGCGTGTGTTGTCAACTGCGCTCGACTCG
CAGCCCCGCGTGGAAGGCTGTGGTGGGGCTTGTTATGAGACTGAATTAGATACAAATATT
TTAGAACTATTATGCTGCACGGAAGCGAGAGATGGAAGCAATATTGGTTTACGAAAGTTG
GCCACCATGTTTGTGTGCGATTACTGCAGCTACCTGTTCGCTAACGGCGAGGCTTTGGAT
AGACATCGCCTGGCGTGTTTCGCACATGAAGATTACTATCCTATACTAATGGAGAATCCT
ATCTTGGAATCAGTTGCTCCTCATGTATCTGAACATCCGTGTGGTGTGTGTGGGAGACAA
TTTGTTAACGGCGAGGAGCTCAGGGCGCACACGATACAGTGCCAGCCTCGGAGACGTCGG
CCTTACTCCGGGAACACCAACAAGATGTGGAACTGTGGATCCTGCAACCAACTATTCACG
ACCGCTAGGGAGCTGTATCGACACAAGCGCGGCGAGGATCGTCCGCCCGGCGCCCCCCTC
ACCGCGTACGTGTGCGAGGACTGTGACAAAGTACTGGGGAGCATGTGCGCGCTGCACACA
CATAAAAAGATGCACAAAGTTTCTAAGCCAGGCTATCCGTGTCGCGTGTGCGGGAGACGC
TTTAACCAGAGCGGTCACCTCGCTATCCACATGCGCATGCATACGGGAGAAAGGCCTTAC
CCGTGCGACCTGTGCGACAAGGCCTTCAAAGTTAAGGTGGAGCGCGATGACCACCGGCGT
ACTCACACCGGCGAGCGACCGTTCGCCTGCACCTCTTGTAGTAAAACTTTCACCGCGGCC
GCCAGGCTCAGGGAACACGCCAGGATACACACGGACCAGAGGCCGTACAAATGCGAAATT
TGCGGGGCAGCCTTCCGGCGGCCGTACGCTCGCACAGTCCACACACTCATACACACGGGG
GAAAAACCTCACGAGTGTGACGTTTGCGGCACAGCGTTCAGACGTTCGGGCGATATGTGG
AAACACAAGAGGACTTTACACGGCATCCAGGGTGCAAGCGGTGATACCAATTGA
Protein sequence:
MMFDPPDFPYKELTDTLGKSFNVETVSTLNVAQTRDEQNLELYVVQSENLFNYEPTLLDD
NTVNQFLLPIQESSDTANKEPEAGPDLLALHSCVICHEIFTTDAELLDHTVLVHATVPTS
DQEPSTSTSVEHIDTQESSFECEWLVCGVCERVLSTALDSQPRVEGCGGACYETELDTNI
LELLCCTEARDGSNIGLRKLATMFVCDYCSYLFANGEALDRHRLACFAHEDYYPILMENP
ILESVAPHVSEHPCGVCGRQFVNGEELRAHTIQCQPRRRRPYSGNTNKMWNCGSCNQLFT
TARELYRHKRGEDRPPGAPLTAYVCEDCDKVLGSMCALHTHKKMHKVSKPGYPCRVCGRR
FNQSGHLAIHMRMHTGERPYPCDLCDKAFKVKVERDDHRRTHTGERPFACTSCSKTFTAA
ARLREHARIHTDQRPYKCEICGAAFRRPYARTVHTLIHTGEKPHECDVCGTAFRRSGDMW
KHKRTLHGIQGASGDTN