| New model in OGS2.0 | DPOGS210778 |
|---|---|
| Genomic Position | scaffold4592:- 94-3599 |
| See gene structure | |
| CDS Length | 861 |
| Paired RNAseq reads | 213 |
| Single RNAseq reads | 714 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004216 (6e-148) |
| Best Drosophila hit | CG5226 (5e-111) |
| Best Human hit | orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (9e-77) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP011279-PA [Tribolium castaneum] (4e-117) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP011279-PA [Tribolium castaneum] (2e-118) |
| GeneOntology terms | GO:0005215 transporter activity GO:0005887 integral to plasma membrane GO:0005328 neurotransmitter:sodium symporter activity GO:0006836 neurotransmitter transport GO:0005326 neurotransmitter transporter activity GO:0005886 plasma membrane |
| InterPro families | IPR000175 Sodium:neurotransmitter symporter |
| Orthology group | MCL11232 |
Nucleotide sequence:
ATGGCGGCTAAAGCGGAGCCGATAGGACCTAGGAATGGACATGAATTGGCACCGTTGAAT
ACAAGAGCTGATGGCAGCGAGCGACCCCATGGGGTGACCATCGTCCTCCAAGGATCCAGG
AACTCCTTGCAGAGAGAGGCTCCAGACGAAGACAGAGCAGCGTGGTCAGGGAAGCTGCAG
TTCTTTCTATCCATTATCGGCTATTCCGTCGGCCTCGGGAACATTTGGAGATTCCCGTAT
CTGTGTCAACAAAATGGCGGCGGTGCTTTTCTGATTCCCTTCCTCATCATGTTGGTTTTG
GAAGGCATACCGCTGTTCCTTATCGAAATGGCCATTGGACAGAAGATGAGATTAGGATCT
CTAGGCGTGTGGAACACTATCCATCCATGGCTTGGCGGGATCGGTATAGCCAGCTGTGTC
GTCACTCTGTTCGTAGCCTTATACTACAACGTCATCATCACATGGGTCTTCTTCTACCTC
TTCAATAGTATTAGGCTTAGCGCCGACCAGCTACCTTGGGCGCACTGCCCTCAAGACAAC
GGAACTGCTGAGGCGGAATGCACCAAGGCTTCAGCGACAGTATACTACTGGTACAGAGAA
GCACTCGACGCAGCACCCAGCATCGAGGAGCCGGGCGTCCCTCGATGGTGGATCGTCCTG
TACTTACTTCTGGCATGGGTCATCGTGTTTTTCATAGTGATGAAGGGAATTCAGAGTAGT
GGGAAGGTGGTATATTTCACGTCATTATTTCCTTACGTTGTGCTGACAATATTTTTTGTA
CGCGGAATCACTTTACCGGGATCAGCTGATGGCGTCATCCATATGTATAAACCAAAGGTA
ATCTATAAAATCCAAAAGTAA
Protein sequence:
MAAKAEPIGPRNGHELAPLNTRADGSERPHGVTIVLQGSRNSLQREAPDEDRAAWSGKLQ
FFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFLIMLVLEGIPLFLIEMAIGQKMRLGS
LGVWNTIHPWLGGIGIASCVVTLFVALYYNVIITWVFFYLFNSIRLSADQLPWAHCPQDN
GTAEAECTKASATVYYWYREALDAAPSIEEPGVPRWWIVLYLLLAWVIVFFIVMKGIQSS
GKVVYFTSLFPYVVLTIFFVRGITLPGSADGVIHMYKPKVIYKIQK