| New model in OGS2.0 | DPOGS206570 |
|---|---|
| Genomic Position | scaffold1886:- 39620-41980 |
| See gene structure | |
| CDS Length | 714 |
| Paired RNAseq reads | 37 |
| Single RNAseq reads | 152 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012176 (3e-20) |
| Best Drosophila hit | CG5245 (4e-19) |
| Best Human hit | zinc finger protein 45 (9e-21) |
| Best NR hit (blastp) | zinc finger protein LOC100125368 [Rattus norvegicus] (9e-21) |
| Best NR hit (blastx) | zinc finger protein LOC100125368 [Rattus norvegicus] (4e-25) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGGAAAATCTAATAGACTCTAATGTGTGTGATACTATAGAGTTACGGAAACCATTAAAG
AGGAAATTGAGAAGGAAAAAATTGGAAAACAAGAGACGTAGAATGCTTCTTATACAACAG
AGATTATCGCAGAAAAATACACAAGCTGGAAATTTAGTTTGTGGTATATGTAATAAAGTA
TTAGCGAACCAACACACATACGACCATCATATGCAACGTCACAACGGATGTAGGTATATT
TGCGAGCACTGCGGCAAAGGATTCCCAGTGAAGACTGAACTCCAAATTCACCAAGTTTCT
AAACACGGGACCGGTCCATATTTACAATGTTCGCATTGTCCTTTCAAAGCCCCCAGGAAA
TTCGATTTAATAGAACACGAAAGAATCCATTCAGGCGAACGGCCCTATACTTGCGAGAAG
TGCGGATTAACATTCCGCAGGCGTGGTATATGGAAGAAACACCTAATATATCACACGGAA
AAGAAAATACAATGTCCACGGTGTCCCAAAAAGTTTTTCCAGCGCAGCGAAATGTTGGCC
CATGCTAATAACGTACACGATAGAGTTTACGTATATTTATGCAGCAAGTGTGGTGCGACG
TACGCAAAAACTGCTACAGTTAGGCGACATATGACCGAAAGGCATGGTATTCCGCGTGAG
ATGCAAGGTAAAGTCGTGAGAATTAATAAGGCTGCTGGTCTTCAGGAACAATAA
Protein sequence:
MENLIDSNVCDTIELRKPLKRKLRRKKLENKRRRMLLIQQRLSQKNTQAGNLVCGICNKV
LANQHTYDHHMQRHNGCRYICEHCGKGFPVKTELQIHQVSKHGTGPYLQCSHCPFKAPRK
FDLIEHERIHSGERPYTCEKCGLTFRRRGIWKKHLIYHTEKKIQCPRCPKKFFQRSEMLA
HANNVHDRVYVYLCSKCGATYAKTATVRRHMTERHGIPREMQGKVVRINKAAGLQEQ