New model in OGS2.0 | DPOGS207503  |
---|---|
Genomic Position | scaffold440:+ 15243-17009 |
See gene structure | |
CDS Length | 1767 |
Paired RNAseq reads   | 392 |
Single RNAseq reads   | 1148 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001925 (0.0) |
Best Drosophila hit   | NELF-B (0.0) |
Best Human hit | negative elongation factor B (4e-137) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL014752 [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL014752 [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0017053 transcriptional repressor complex GO:0003729 mRNA binding GO:0007070 negative regulation of transcription from RNA polymerase II promoter, mitotic |
InterPro families   | IPR010405 Cofactor of BRCA1 |
Orthology group | MCL13494 |
Nucleotide sequence:
ATGGCGTCATCCAGTAAACTACCAGGAACTGGTTTGGAAGATGTAGGAGTGCCAGGACAA
ACATTTCTCCGAGACGCTCTTACAAGTTGCACGGACCCTTTGAAAGCTATTGAAGAATTT
CAATTGGAGAATGGAATTTTATTACCATCCTTACGGCCTATGCTTCCTCTGCTAGATCTT
CACGGTGTTCGAAGGCTAGACTTTCATACATCAGTATTGGAAGAATTAAGAGATAAACTA
ATAGCTCACATTAATGAAATGGGCGGCAAAGATAGGTTAAAAGAACACGAAAAAAAATTG
AAAGAATTGTTGAATAAAAGCTTTCCTGTCGTGAAGGTTAAGGCTTTACGGCCAGTTATA
ATGAGTATTTTAAAAAATACTCCACATATAGATGATAAATATTTACGAGTTTTGGTCAGA
GACCGAGATCTTTACAATGACACAGATACTGAAGTAAAAAGACAGATTTGGCAAGATAAT
CAATCTCTGTTTGGAGATGAAGTGTCTCCATTACTGAGTCAGTATATAAGGGAAAAGGAA
AATATACTATTTGACCATGAGAACCTTGGAAATTTATTTTTCTCACCCTCACCGAAAGTG
AGACGACAAGGAGCTGTTATTCAAAAACTAGCACATATGGTTGGTACTAGTATAAAACTA
TATGACATGGTATTGCAGTTTCTTCGCACTCTATTTCTTAGGACAAGAAATGTCCACTAT
TGTACATTGAGAGCAGAACTCTTGATGGCGCTTCATGATGTAGAGGTTCATGAAATTATA
TCCGTGGATCCCTGCCATAAATTCACTTGGTGTTTAGATGCATGTATTAGAGAAAGGAAT
GTTGATATTAAGAGGTCTAGAGAATTACAAGGTTTTCTTGACAATGTTAAGAAGGGCCAC
GAACAAGTTTTGGGAGATTTATCCATGACTCTCTGCGATCCATATGCAGTCAACTTTCTA
GCGACATCTGCAATAAAAATCTTGCAACATTTGATTAACACCGAAGGTCTACCAAGAGAC
AACACAATATTGATTCTGTTATTAAGAATGTTAGCGTTAGGCTTAAGTGCTTGGGAAATA
ATTGATACGCAAAACTTTAAGGAGCCTAAACTTGACAGTCAAGTTGTTACGAAATATCTA
CCGGCGATGATGTCTCTTATGGTGGATGACCAAGTGAGAGCATTACATAATAAACTGCCA
CCCGATGAGAGAGAATCTGCTATAACAACCATAGAACATTCCGGCCCACCACCTGATGCT
TGTGAGGCCTACATGAGAGAAAGTTCAGTGTGTGGCGTTCTTGCAATGTATTACACACTC
CATGCTGCCAAGTCACGAGATAGAATAGCTATATTGAGAATATTAAGCATCCTGGGAAGC
TGCAAAGACGGTAAAGCATATGAAGACCCATTCTTACATGCACTCGTGGCTCTCTTAATA
CAATTACCGGACGAGTTTCAAGGCGAAGATTTCAGTACCGTTCTATTTGACGAGTTCTTC
TTTGCTGGTCTCTCAAAAGATAATGTCACAAGACATTTATTGAAACTGCTATGGTATATA
CATCCAAAATTGCCAGAAACCAGAATACATACGTTAATGAAGGCTCTGCAGCCTGGGACA
CAGCACAACGAATCTGTGCATAAAATGTATGAAGCGATGCAGCAGAAGATGAATGCACAA
GCTGAACCTGTGCCTGCAACTAGCGAAATGGAATATCTCGACTCGCCTTTGATGAGTGTT
CCTACGCCCGCGCCTTATCACATGTAG
Protein sequence:
MASSSKLPGTGLEDVGVPGQTFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDL
HGVRRLDFHTSVLEELRDKLIAHINEMGGKDRLKEHEKKLKELLNKSFPVVKVKALRPVI
MSILKNTPHIDDKYLRVLVRDRDLYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKE
NILFDHENLGNLFFSPSPKVRRQGAVIQKLAHMVGTSIKLYDMVLQFLRTLFLRTRNVHY
CTLRAELLMALHDVEVHEIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDNVKKGH
EQVLGDLSMTLCDPYAVNFLATSAIKILQHLINTEGLPRDNTILILLLRMLALGLSAWEI
IDTQNFKEPKLDSQVVTKYLPAMMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDA
CEAYMRESSVCGVLAMYYTLHAAKSRDRIAILRILSILGSCKDGKAYEDPFLHALVALLI
QLPDEFQGEDFSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIHTLMKALQPGT
QHNESVHKMYEAMQQKMNAQAEPVPATSEMEYLDSPLMSVPTPAPYHM