| New model in OGS2.0 | DPOGS210043 |
|---|---|
| Genomic Position | scaffold6810:+ 789-7329 |
| See gene structure | |
| CDS Length | 1779 |
| Paired RNAseq reads | 1934 |
| Single RNAseq reads | 4669 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000473 (1e-69) |
| Best Drosophila hit | pacman, isoform A (2e-32) |
| Best Human hit | 5'-3' exoribonuclease 1 isoform a (1e-36) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013457 [Tribolium castaneum] (1e-47) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013457 [Tribolium castaneum] (3e-47) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005515 protein binding GO:0005622 intracellular GO:0005737 cytoplasm GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0008409 5'-3' exonuclease activity GO:0071044 histone mRNA catabolic process |
| InterPro families | ND |
| Orthology group | MCL25414 |
Nucleotide sequence:
GTGCTGAGTTCAGAGTCTATTCGTAGCGGTCGTATAAAGGTGTCCGTCCGCGAATGTACG
GAGCCGGTAGTGGCCAGCCAGTGTTTCGTGAGCCCCTACCGCACCACTCACCACGCGGCC
GCTTCATGCGGGATATCTAATCAGCTATTGTCCCGTATAACGGGAACAGTCCTCGTCATA
CCCGGAGAGAGAAACGATCTCCCCACTGAGACGCAGAACAAAATAAACGTCGGACTAAAT
CTTAAGTTCAATAAGAAGAACCAGGAGGTGTCGGGTTACAGTCGTCGGAGTGCGAACGGC
TGGGTGTATTCCCCCCGGTGTGTGGCGCTCGTGCAGGAGTACGCGGCCAAATATCCTGAA
TTGTTCGACGCCCTCGCCAACGCTCATAGAGACGTGTTCTTTGAAAGCGATTTATGGCCC
GGGGATTTGGGCAAGAACAAAGTTCAAGATATAGCGGCCTGGTTGAAGTCCCAGCCTCAC
AGCAGCGCGCCGAGGCGAGAGTGCGGCTCCGAGGCCTTGGAACCGGAAGAGATGAGGGCT
CTCTACAACACGCTGGAGACACAGATACGCGACCTCAAGGACAAGGAGAAGAACGTCACG
CTGCACGTCAAATGGAGCCTGCTTTATAAGTGTGAACTCCACGAGGGGAACATCCAGCCG
GATGTCAAAGCTGACTACCGGATGTACGACCGCGTGGTGTGCGTGGCCAGCAATATAACT
GTGCCTCTGGGGTCAAAGGGCACCATCACCGCCATCTATCAGCCGTCCAACGGAAACACC
GTCCGCCTATCTGACAAGTTGAACGCCTCGCCCAGCTACCAGGTCATGTTTGACGAACCC
TTCCCTGGCGCCATGAAGGAAGATCTGTTCGAGGAGGCCAGGTTCTATAGGATGCAGCCC
GCTCATATATTGAATATATCATACGGGCGGAAATTACGCACCGCGAGCGAGCCCCAGGGC
TTCGAGTACAACCAGTCGGCACAACATAACTACACTTGTAACTCACAACCGCCCACCGTA
CTACGGAGAGATGACGGACACTACTCTGCCTTCGCCAGCTACAGCCCCCCGCGAGAGATC
AAGACACCAGTGATTGAACATAAGCCTATCGTTAACAACAACGTTAAAAACGGCCAGACG
CCGGACAGCGCCACCAACCTGCTGAGAAGTCTGTTGAGGATCAGCGAGGGAGAGGCGGAC
GGATCCAGGAGCAATAAGAATGTTCCAGAGACGAACAGCAACTGGCGTTCAAGAAGTGAC
AAAGCGACCTCGCCGAATAAAACAACTCAAAACAACTGGCGAAGAGAGGCAAATACATAC
AGTCAGGGAGAGTGGAGCAACACACAGAGACAGAAGCCTATCGGGATGCCATCTATGCCG
TACCCGTGTTTCGGCGCCTCGCCCCCTCGCCCGCACCAGCCCCAAAGCTTCCCCAAACAC
TTACCGGACGTCAGCCAAGGAATCAATCTCATGCCGTCCTGGACTAAGAACGAGAACATA
AAATCCGTTCCGCAGCCGGCTCAGCAAACAAACAGACAAGTCAACAACGGGGAGAAGTAC
AGCAATCCATTTGTTCCGCTGCAAGTTCAAACCAGCCGGAGGCGCGTCCAAAACTCAAGT
GGTTCATCACAGAGACGTGATCTCGAAGGACTACCGACACCGAAGGTCATTCACCCCACA
CCAAATAACACCTTGTTTAATGTTCAGCCGCAGCAGAATCGTCCTCAGAGGAAGAAAAAA
CCAAGAATAGCTGCCAACTTGCCCTTCCAGATGGACTAA
Protein sequence:
VLSSESIRSGRIKVSVRECTEPVVASQCFVSPYRTTHHAAASCGISNQLLSRITGTVLVI
PGERNDLPTETQNKINVGLNLKFNKKNQEVSGYSRRSANGWVYSPRCVALVQEYAAKYPE
LFDALANAHRDVFFESDLWPGDLGKNKVQDIAAWLKSQPHSSAPRRECGSEALEPEEMRA
LYNTLETQIRDLKDKEKNVTLHVKWSLLYKCELHEGNIQPDVKADYRMYDRVVCVASNIT
VPLGSKGTITAIYQPSNGNTVRLSDKLNASPSYQVMFDEPFPGAMKEDLFEEARFYRMQP
AHILNISYGRKLRTASEPQGFEYNQSAQHNYTCNSQPPTVLRRDDGHYSAFASYSPPREI
KTPVIEHKPIVNNNVKNGQTPDSATNLLRSLLRISEGEADGSRSNKNVPETNSNWRSRSD
KATSPNKTTQNNWRREANTYSQGEWSNTQRQKPIGMPSMPYPCFGASPPRPHQPQSFPKH
LPDVSQGINLMPSWTKNENIKSVPQPAQQTNRQVNNGEKYSNPFVPLQVQTSRRRVQNSS
GSSQRRDLEGLPTPKVIHPTPNNTLFNVQPQQNRPQRKKKPRIAANLPFQMD