| New model in OGS2.0 | DPOGS208900 |
|---|---|
| Genomic Position | scaffold6192:+ 415-13595 |
| See gene structure | |
| CDS Length | 1476 |
| Paired RNAseq reads | 1518 |
| Single RNAseq reads | 3881 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002475 (8e-109) |
| Best Drosophila hit | CG4096, isoform B (1e-15) |
| Best Human hit | A disintegrin and metalloproteinase with thrombospondin motifs 3 preproprotein (5e-33) |
| Best NR hit (blastp) | A disintegrin and metalloproteinase with thrombospondin motifs 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | A disintegrin and metalloproteinase with thrombospondin motifs 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0008237 metallopeptidase activity GO:0008233 peptidase activity GO:0005575 cellular_component GO:0046872 metal ion binding GO:0007229 integrin-mediated signaling pathway GO:0051605 protein maturation by peptide bond cleavage |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat |
| Orthology group | MCL39666 |
Nucleotide sequence:
ATGGCACCAACAGTGTTGGCAACGCTGCATAATTACGCTTGGTCTTCGTGTTCACGAGAA
CAGTTCCACGAGAAGTCTAAGAAGTGGTGGTGCCTTCATGAGCGAAGTCAGGATGATGGT
GTTGAATTAGGTGGTGCCAAAGAACTTTATAATTACGTTTTTACCATGGATGAACAGTGC
CGTACCGAGTTTGGGGAAGGATTCTCAGTATGTAAGTCGGTGAAAGTACGGTCAGCGTGT
GCCAAGCTGTGGTGCGCTCATCGGGCTATGCCTCATGTGTGCCGTTCAAAACGAGCGCCA
CCATTAGAAGGGACGCCTTGCGGAACAAATCAATGGTGTGTGGATCGTGTCTGTGAGCCG
ATGCCAGGTCATGCTGTTGAAAATAAGAATAAGGAAGTAGAATCCAAAACACCGCAGTGG
GGGGAATGGAGCCCGTGGAGCGATTGTAACACCGAGTGTGGATACGGCCTTCGATCACGG
ACACGGAGATGTAAATATAAAGGGGTGACTTCGACATTATGCGAAGGTGCGGGGTCCCAA
GTATCTACTTGTTGGACCGGAGCACCCTGTGCTAGTACCAGGGATGCGAGAGCTGACGCT
TGTTCCAGACAGGCAACAAATTTCATACCTCATCTACACGTTGATGAATCTAATCACTGT
GAGACGTGGTGTGTGGATTTCGCCGGTGGAAATCTTTCCAACTTTGGACCTCTACCCGAT
GGGGCTCCCTGTAGTTATGAGAGGCCTTACGATCTTTGCTATCAGGGCACATGCGTGAAG
GGACAGTGCAATGCAACGGATCCGGTGTGCAACTGGTGTCCTGATGGTTATTGCAACAAT
AACACTCACATATACACAAGACAATTGGGCAAAGGTTGGACACGTTTGACAGTAATACCT
CACGAAGCTGCACAGCTCTCAGTTCACATAGCTACCCCCGTACCATTAAACATCGCGATA
CGTGAGCGACGCCGTGACCGTCCAATACTACAGCTGACAAAACATTCTAGAACCATCGAG
ATAGATCACAAACAAGACGACAATCACAAACAGGGGCAGGATTATTTAAAGTACTACGTG
CCACAGAACTTGCAGATCATAGACGTGGATAGCAATGTTTTAGACATAAAGGAACGCTTC
GGGCTCGAAGGAGAAGTGGCAGCCGCTGGTAGTCTCTTGAGATGGACTCAGACTGAATCA
GACGTAATGATAACATCCACTTCAAGATTACAAACTGATTTAATGATAATGGCTGTTCCG
ACCACATCTACTGAAGACACAATCGCTGTGGAAGTATCTGTCAACTACAGTACGCCTGCT
GGTCGTACCAGACCTTTGGAGTACAGGTGGTCGAGCGAACGTGGTCCGTGTTCTGTATCT
TGTGGTGGTGGATTGCGCGCAGTACGACCACGTTGTCAACGAGGCGGTCAGTCATGCGGC
CCGGTGAGATATGAAACGTGCAACTCAAACAGGTAA
Protein sequence:
MAPTVLATLHNYAWSSCSREQFHEKSKKWWCLHERSQDDGVELGGAKELYNYVFTMDEQC
RTEFGEGFSVCKSVKVRSACAKLWCAHRAMPHVCRSKRAPPLEGTPCGTNQWCVDRVCEP
MPGHAVENKNKEVESKTPQWGEWSPWSDCNTECGYGLRSRTRRCKYKGVTSTLCEGAGSQ
VSTCWTGAPCASTRDARADACSRQATNFIPHLHVDESNHCETWCVDFAGGNLSNFGPLPD
GAPCSYERPYDLCYQGTCVKGQCNATDPVCNWCPDGYCNNNTHIYTRQLGKGWTRLTVIP
HEAAQLSVHIATPVPLNIAIRERRRDRPILQLTKHSRTIEIDHKQDDNHKQGQDYLKYYV
PQNLQIIDVDSNVLDIKERFGLEGEVAAAGSLLRWTQTESDVMITSTSRLQTDLMIMAVP
TTSTEDTIAVEVSVNYSTPAGRTRPLEYRWSSERGPCSVSCGGGLRAVRPRCQRGGQSCG
PVRYETCNSNR