New model in OGS2.0 | DPOGS202278  |
---|---|
Genomic Position | scaffold3642:+ 99-9153 |
See gene structure | |
CDS Length | 1098 |
Paired RNAseq reads   | 36 |
Single RNAseq reads   | 434 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000065 (3e-38) |
Best Drosophila hit   | CG1753, isoform B (6e-19) |
Best Human hit | cystathionine beta-synthase (1e-24) |
Best NR hit (blastp)   | PREDICTED: similar to cystathionine-beta-synthase [Taeniopygia guttata] (1e-27) |
Best NR hit (blastx)   | PREDICTED: similar to Cystathionine-beta-synthase [Strongylocentrotus purpuratus] (1e-26) |
GeneOntology terms    | GO:0030170 pyridoxal phosphate binding GO:0005737 cytoplasm GO:0003824 catalytic activity GO:0006535 cysteine biosynthetic process from serine GO:0019343 cysteine biosynthetic process via cystathionine GO:0004122 cystathionine beta-synthase activity GO:0008152 metabolic process |
InterPro families   | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit |
Orthology group | MCL10692 |
Nucleotide sequence:
GTAGAAGGAATAGGAGGACAGGAAGTTCCTATTGTCCTTGACAAATCTTTAGTAGACGAT
TTCGAAATTGTGACGGATAAAGAAGCGTTTCTCATGTCGCGGGAAATAATTAGAAAGGAA
GGATTACTTTGTGGAGGCAGCAGCGGTGCGGCAATGGTTGCAGCAATAAAAGCAATCCAG
AAGCGAAAATTCACTGCCGGTCAGCATGTGGTAGTCGTGCTACCAGACAGCATTCGTAAC
TACATGACCAAATTCGTCACTCTAGTTACCTACCTTCGAGTGGAGTTTATTGATCCGCCA
CAACACGCTTCACCGTGGTGGAATGATCCCGTCACTCACTTAACCCTGGGACACACTTAC
CCTATTCTAAGCAGTGACCAAACGTGCTCTGAAGCCATACTCGAAATGATGAAAGAGAAT
ATTGCTATTGTGGTAGAGACGAACGGAAATTTCTTAGGAGCAGTGACAAAGGATGGCCTG
CGTTCAGAAGCAACAAATCCAATGAGACTTCCACACAAAAGTATTCAAGAGCTAAACTTC
CAAGACTTTGTATCTGATCATTTGGTCAAAGATTGTTTCACACTGGCCAAAAACAGTGAA
CGTGGAATGCCAACTATAGGTCTATTATCCCGCATGTTGGACGTAGCACAATTTGTTGTC
ATCGGAAGAAATGTACATGAACTTGGACAAAAGAGAGGAGCTTCAACCGAACCTGGGACT
TGCGACCCAGGTGTAGGTTTAAGGGGCCCCTATCTAACGCGCGTTAAACGCTCATCTCCA
CCGTCCAAGCTCCTGTCGAAAAGTAATATGAGTTCAATCAGTGGAATATTTAGCGGAGAC
AACGCTAGACGGAGACTGGCTCATTTGTCAGGATCCACAGAAGAGCCTCTTGATAAATTT
ACAGTAAAGAAGTTTTACAAAGTGGACCTCTCTGACAATCCAACGCTGGGCTGTGTATCG
AGAATACTGGATATAGCACCTTATGTTGTGGTTGTCAAAACAGATGAGCATCACGTTCAA
AAACCGCTCGGCTACCTGACGTCTGAAGATCTACTAGCATGTATCACAGATAAAAACCAC
GATCTGAATGGAAAATGA
Protein sequence:
VEGIGGQEVPIVLDKSLVDDFEIVTDKEAFLMSREIIRKEGLLCGGSSGAAMVAAIKAIQ
KRKFTAGQHVVVVLPDSIRNYMTKFVTLVTYLRVEFIDPPQHASPWWNDPVTHLTLGHTY
PILSSDQTCSEAILEMMKENIAIVVETNGNFLGAVTKDGLRSEATNPMRLPHKSIQELNF
QDFVSDHLVKDCFTLAKNSERGMPTIGLLSRMLDVAQFVVIGRNVHELGQKRGASTEPGT
CDPGVGLRGPYLTRVKRSSPPSKLLSKSNMSSISGIFSGDNARRRLAHLSGSTEEPLDKF
TVKKFYKVDLSDNPTLGCVSRILDIAPYVVVVKTDEHHVQKPLGYLTSEDLLACITDKNH
DLNGK